Proteomic analysis of Salmonella enterica serovar Typhimurium isolated from RAW 264.7 macrophages identification of a novel protein that contributes to the replication of … L Shi, JN Adkins, JR Coleman, AA Schepmoes, A Dohnkova, HM Mottaz, ... Journal of Biological Chemistry 281 (39), 29131-29140, 2006 | 177 | 2006 |
Application of targeted mass spectrometry in bottom-up proteomics for systems biology research NP Manes, A Nita-Lazar Journal of proteomics 189, 75-90, 2018 | 112 | 2018 |
Comparative proteomics of human monkeypox and vaccinia intracellular mature and extracellular enveloped virions NP Manes, RD Estep, HM Mottaz, RJ Moore, TRW Clauss, ME Monroe, ... Journal of proteome research 7 (3), 960-968, 2008 | 99 | 2008 |
Crystal Structure of the Hypoxia-inducible Form of 6-Phosphofructo-2-kinase/fructose-2, 6-bisphosphatase (PFKFB3) A POSSIBLE NEW TARGET FOR CANCER THERAPY SG Kim, NP Manes, MR El-Maghrabi, YH Lee Journal of Biological Chemistry 281 (5), 2939-2944, 2006 | 73 | 2006 |
Xlink-identifier: an automated data analysis platform for confident identifications of chemically cross-linked peptides using tandem mass spectrometry X Du, SM Chowdhury, NP Manes, S Wu, MU Mayer, JN Adkins, ... Journal of proteome research 10 (3), 923-931, 2011 | 62 | 2011 |
Bacillus anthracis interacts with plasmin (ogen) to evade C3b-dependent innate immunity MC Chung, JH Tonry, A Narayanan, NP Manes, RS Mackie, B Gutting, ... PloS one 6 (3), e18119, 2011 | 56 | 2011 |
Targeted protein degradation by Salmonella under phagosome-mimicking culture conditions investigated using comparative peptidomics NP Manes, JK Gustin, J Rue, HM Mottaz, SO Purvine, AD Norbeck, ... Molecular & Cellular Proteomics 6 (4), 717-727, 2007 | 55 | 2007 |
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase: suiting structure to need, in a family of tissue-specific enzymes MR El-Maghrabi, F Noto, N Wu, N Manes Current Opinion in Clinical Nutrition & Metabolic Care 4 (5), 411-418, 2001 | 47 | 2001 |
Multi-omics strategies uncover host–pathogen interactions MM Khan, O Ernst, NP Manes, BL Oyler, IDC Fraser, DR Goodlett, ... ACS infectious diseases 5 (4), 493-505, 2019 | 45 | 2019 |
Discovery of mouse spleen signaling responses to anthrax using label-free quantitative phosphoproteomics via mass spectrometry NP Manes, L Dong, W Zhou, X Du, N Reghu, AC Kool, D Choi, CL Bailey, ... Molecular & Cellular Proteomics 10 (3), 2011 | 45 | 2011 |
LPS Tolerance Inhibits Cellular Respiration and Induces Global Changes in the Macrophage Secretome J Gillen, T Ondee, D Gurusamy, J Issara-Amphorn, NP Manes, SH Yoon, ... Biomolecules 11 (2), 164, 2021 | 44 | 2021 |
Linear discriminant analysis-based estimation of the false discovery rate for phosphopeptide identifications X Du, F Yang, NP Manes, DL Stenoien, ME Monroe, JN Adkins, DJ States, ... Journal of proteome research 7 (6), 2195-2203, 2008 | 43* | 2008 |
The kinase activity of human brain 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase is regulated via inhibition by phosphoenolpyruvate NP Manes, MR El-Maghrabi Archives of biochemistry and biophysics 438 (2), 125-136, 2005 | 43 | 2005 |
Characterization of functional reprogramming during osteoclast development using quantitative proteomics and mRNA profiling E An, M Narayanan, NP Manes, A Nita-Lazar Molecular & Cellular Proteomics 13 (10), 2687-2704, 2014 | 39 | 2014 |
Proteome and secretome analysis reveals differential post-transcriptional regulation of Toll-like receptor responses M Koppenol-Raab, V Sjoelund, NP Manes, RA Gottschalk, B Dutta, ... Molecular & Cellular Proteomics 16 (4), S172-S186, 2017 | 38 | 2017 |
A computational strategy to analyze label-free temporal bottom-up proteomics data X Du, SJ Callister, NP Manes, JN Adkins, RA Alexandridis, X Zeng, ... Journal of proteome research 7 (7), 2595-2604, 2008 | 35 | 2008 |
Microbiota and adipocyte mitochondrial damage in type 2 diabetes are linked by Mmp12+ macrophages Z Li, M Gurung, RR Rodrigues, J Padiadpu, NK Newman, NP Manes, ... Journal of Experimental Medicine 219 (7), e20220017, 2022 | 29 | 2022 |
Optimization of proteomic sample preparation procedures for comprehensive protein characterization of pathogenic systems HM Mottaz-Brewer, AD Norbeck, JN Adkins, NP Manes, C Ansong, L Shi, ... Journal of biomolecular techniques: JBT 19 (5), 285, 2008 | 22 | 2008 |
Characterization of Macaque Pulmonary Fluid Proteome during Monkeypox Infection JN Brown, RD Estep, D Lopez-Ferrer, HM Brewer, TR Clauss, NP Manes, ... Molecular & Cellular Proteomics 9 (12), 2760-2771, 2010 | 20 | 2010 |
Molecular mechanisms of the toll-like receptor, STING, MAVS, inflammasome, and interferon pathways NP Manes, A Nita-Lazar Msystems 6 (3), 10.1128/msystems. 00336-21, 2021 | 17 | 2021 |