| DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput V Demichev, CB Messner, SI Vernardis, KS Lilley, M Ralser Nature methods 17 (1), 41-44, 2020 | 1167 | 2020 |
| Ultra-high-throughput clinical proteomics reveals classifiers of COVID-19 infection CB Messner, V Demichev, D Wendisch, L Michalick, M White, A Freiwald, ... Cell systems 11 (1), 11-24. e4, 2020 | 482 | 2020 |
| Ultra-fast proteomics with Scanning SWATH CB Messner, V Demichev, N Bloomfield, JSL Yu, M White, M Kreidl, ... Nature biotechnology 39 (7), 846-854, 2021 | 222 | 2021 |
| A time-resolved proteomic and prognostic map of COVID-19 V Demichev, P Tober-Lau, O Lemke, T Nazarenko, C Thibeault, ... Cell systems 12 (8), 780-794. e7, 2021 | 145 | 2021 |
| Machine learning predicts the yeast metabolome from the quantitative proteome of kinase knockouts A Zelezniak, J Vowinckel, F Capuano, CB Messner, V Demichev, ... Cell systems 7 (3), 269-283. e6, 2018 | 94 | 2018 |
| Microbial communities form rich extracellular metabolomes that foster metabolic interactions and promote drug tolerance JSL Yu, C Correia-Melo, F Zorrilla, L Herrera-Dominguez, MY Wu, J Hartl, ... Nature microbiology 7 (4), 542-555, 2022 | 68 | 2022 |
| Persistent complement dysregulation with signs of thromboinflammation in active Long Covid C Cervia-Hasler, SC Brüningk, T Hoch, B Fan, G Muzio, RC Thompson, ... Science 383 (6680), eadg7942, 2024 | 64 | 2024 |
| Nonenzymatic gluconeogenesis-like formation of fructose 1, 6-bisphosphate in ice CB Messner, PC Driscoll, G Piedrafita, MFL De Volder, M Ralser Proceedings of the National Academy of Sciences 114 (28), 7403-7407, 2017 | 60 | 2017 |
| A new type of metal chelate affinity chromatography using trivalent lanthanide ions for phosphopeptide enrichment MR Mirza, M Rainer, CB Messner, Y Güzel, D Schemeth, T Stasyk, ... Analyst 138 (10), 2995-3004, 2013 | 49 | 2013 |
| A proteomic survival predictor for COVID-19 patients in intensive care V Demichev, P Tober-Lau, T Nazarenko, O Lemke, S Kaur Aulakh, ... PLOS Digital Health 1 (1), e0000007, 2022 | 44 | 2022 |
| Mass spectrometry‐based high‐throughput proteomics and its role in biomedical studies and systems biology CB Messner, V Demichev, Z Wang, J Hartl, G Kustatscher, M Mülleder, ... Proteomics 23 (7-8), 2200013, 2023 | 42 | 2023 |
| Selective enrichment of phosphopeptides by a metal–organic framework CB Messner, MR Mirza, M Rainer, OMD Lutz, Y Güzel, TS Hofer, ... Analytical methods 5 (9), 2379-2383, 2013 | 38 | 2013 |
| Structure and dynamics of the Zr 4+ ion in water CB Messner, TS Hofer, BR Randolf, BM Rode Physical Chemistry Chemical Physics 13 (1), 224-229, 2011 | 32 | 2011 |
| The proteomic landscape of genome-wide genetic perturbations CB Messner, V Demichev, J Muenzner, SK Aulakh, N Barthel, A Röhl, ... Cell 186 (9), 2018-2034. e21, 2023 | 31 | 2023 |
| Cell-cell metabolite exchange creates a pro-survival metabolic environment that extends lifespan C Correia-Melo, S Kamrad, R Tengölics, CB Messner, P Trebulle, ... Cell 186 (1), 63-79. e21, 2023 | 27 | 2023 |
| Highly selective recovery of phosphopeptides using trypsin-assisted digestion of precipitated lanthanide–phosphoprotein complexes Y Güzel, M Rainer, MR Mirza, CB Messner, GK Bonn Analyst 138 (10), 2897-2905, 2013 | 27 | 2013 |
| Combined Ab Initio Computational and Infrared Spectroscopic Study of the cis- and trans-Bis(glycinato)copper(II) Complexes in Aqueous Environment OMD Lutz, CB Messner, TS Hofer, M Glätzle, CW Huck, GK Bonn, ... The Journal of Physical Chemistry Letters 4 (9), 1502-1506, 2013 | 23 | 2013 |
| The natural diversity of the yeast proteome reveals chromosome-wide dosage compensation in aneuploids J Muenzner, P Trébulle, F Agostini, CB Messner, M Steger, A Lehmann, ... BioRxiv, 2022.04. 06.487392, 2022 | 20 | 2022 |
| Cysteine and iron accelerate the formation of ribose-5-phosphate, providing insights into the evolutionary origins of the metabolic network structure G Piedrafita, SJ Varma, C Castro, CB Messner, L Szyrwiel, JL Griffin, ... PLoS Biology 19 (12), e3001468, 2021 | 18 | 2021 |
| Clinical classifiers of COVID-19 infection from novel ultra-high-throughput proteomics CB Messner, V Demichev, D Wendisch, L Michalick, M White, A Freiwald, ... MedRxiv, 2020.04. 27.20081810, 2020 | 17 | 2020 |
