Discovery and preclinical validation of drug indications using compendia of public gene expression data M Sirota, JT Dudley, J Kim, AP Chiang, AA Morgan, A Sweet-Cordero, ... Science translational medicine 3 (96), 96ra77-96ra77, 2011 | 878 | 2011 |
Clinical assessment incorporating a personal genome EA Ashley, AJ Butte, MT Wheeler, R Chen, TE Klein, FE Dewey, ... The Lancet 375 (9725), 1525-1535, 2010 | 810 | 2010 |
Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease JT Dudley, M Sirota, M Shenoy, RK Pai, S Roedder, AP Chiang, ... Science translational medicine 3 (96), 96ra76-96ra76, 2011 | 648 | 2011 |
FoxO3 regulates neural stem cell homeostasis VM Renault, VA Rafalski, AA Morgan, DAM Salih, JO Brett, AE Webb, ... Cell stem cell 5 (5), 527-539, 2009 | 632 | 2009 |
Overview of BioCreative II gene normalization AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ... Genome biology 9, 1-19, 2008 | 411 | 2008 |
Proline: the distribution, frequency, positioning, and common functional roles of proline and polyproline sequences in the human proteome AA Morgan, E Rubenstein PloS one 8 (1), e53785, 2013 | 304 | 2013 |
BioCreAtIvE task 1A: gene mention finding evaluation A Yeh, A Morgan, M Colosimo, L Hirschman BMC bioinformatics 6, 1-10, 2005 | 284 | 2005 |
A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation P Khatri, S Roedder, N Kimura, K De Vusser, AA Morgan, Y Gong, ... Journal of Experimental Medicine 210 (11), 2205-2221, 2013 | 243 | 2013 |
Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge M Krallinger, A Morgan, L Smith, F Leitner, L Tanabe, J Wilbur, ... Genome biology 9, 1-9, 2008 | 228 | 2008 |
Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup AS Yeh, L Hirschman, AA Morgan arXiv preprint cs/0308032, 2003 | 224 | 2003 |
Overview of BioCreAtIvE task 1B: normalized gene lists L Hirschman, M Colosimo, A Morgan, A Yeh BMC bioinformatics 6, 1-10, 2005 | 216 | 2005 |
Expression-based genome-wide association study links the receptor CD44 in adipose tissue with type 2 diabetes K Kodama, M Horikoshi, K Toda, S Yamada, K Hara, J Irie, M Sirota, ... Proceedings of the National Academy of Sciences 109 (18), 7049-7054, 2012 | 176 | 2012 |
Identification of an IFN-γ/mast cell axis in a mouse model of chronic asthma M Yu, MR Eckart, AA Morgan, K Mukai, AJ Butte, M Tsai, SJ Galli The Journal of clinical investigation 121 (8), 3133-3143, 2011 | 158 | 2011 |
Rutabaga by any other name: extracting biological names L Hirschman, AA Morgan, AS Yeh Journal of Biomedical Informatics 35 (4), 247-259, 2002 | 158 | 2002 |
Rapidly retargetable approaches to de-identification in medical records B Wellner, M Huyck, S Mardis, J Aberdeen, A Morgan, L Peshkin, A Yeh, ... Journal of the American Medical Informatics Association 14 (5), 564-573, 2007 | 156 | 2007 |
FoxO6 regulates memory consolidation and synaptic function DAM Salih, AJ Rashid, D Colas, L de la Torre-Ubieta, RP Zhu, AA Morgan, ... Genes & development 26 (24), 2780-2801, 2012 | 142 | 2012 |
Type 2 diabetes risk alleles demonstrate extreme directional differentiation among human populations, compared to other diseases R Chen, E Corona, M Sikora, JT Dudley, AA Morgan, A Moreno-Estrada, ... PLoS genetics 8 (4), e1002621, 2012 | 129 | 2012 |
Gene name identification and normalization using a model organism database AA Morgan, L Hirschman, M Colosimo, AS Yeh, JB Colombe Journal of biomedical informatics 37 (6), 396-410, 2004 | 117 | 2004 |
Integrated multi-cohort transcriptional meta-analysis of neurodegenerative diseases MD Li, TC Burns, AA Morgan, P Khatri Acta neuropathologica communications 2, 1-23, 2014 | 116 | 2014 |
Translational bioinformatics in the cloud: an affordable alternative JT Dudley, Y Pouliot, R Chen, AA Morgan, AJ Butte Genome medicine 2, 1-6, 2010 | 114 | 2010 |