Ines Thiele 个人学术档案 - 学术资源搜索

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Ronan M.T. FlemingAssoc. Prof., School of Medicine, University of Galway.在 universityofgalway.ie 的电子邮件经过验证
Almut HeinkenUniversity of Lorraine在 univ-lorraine.fr 的电子邮件经过验证
Stefania MagnusdottirPhD Student, University of Luxembourg在 uni.lu 的电子邮件经过验证
Thomas HankemeierProfessor of Analytical Biosciences, Leiden University在 lacdr.leidenuniv.nl 的电子邮件经过验证
Adam FeistUC San Diego (UCSD) / Technical University of Denmark (DTU)在 ucsd.edu 的电子邮件经过验证
Nathan E LewisProfessor, University of California, San Diego在 ucsd.edu 的电子邮件经过验证
Nathan D. PriceProfessor, Buck Institute for Research on Aging在 buckinstitute.org 的电子邮件经过验证
Gabi KastenmüllerHelmholtz Zentrum München - German Research Center for Environmental Health在 helmholtz-muenchen.de 的电子邮件经过验证
Karen P. ScottSenior Research Fellow, Rowett Institute of Nutrition and Health, University of Aberdeen在 abdn.ac.uk 的电子邮件经过验证
David BroadhurstProfessor, Biosystems Data Science, School of Science, Edith Cowan University在 ecu.edu.au 的电子邮件经过验证
Marta CascanteUniversitat de Barcelona在 ub.edu 的电子邮件经过验证
Warwick DunnDepartment of Biochemistry and Systems Biology, ISMIB, University of Liverpool在 liverpool.ac.uk 的电子邮件经过验证
David WishartProfessor, Depts. of Computing Science and Biological Sciences - University of Alberta在 ualberta.ca 的电子邮件经过验证
Matej OrešičProfessor of Medicine (Systems Medicine), Örebro University & University of Turku在 oru.se 的电子邮件经过验证
Lorraine BrennanUCD在 ucd.ie 的电子邮件经过验证
Oliver FiehnUC Davis在 ucdavis.edu 的电子邮件经过验证
Markus HerrgardCTO, BioInnovation Institute在 bii.dk 的电子邮件经过验证
Michael SaundersProfessor of Operations Research, Stanford University在 stanford.edu 的电子邮件经过验证
Heinz P. NasheuerProfessor, Dr. rer. nat., University of Galway, School of Biological and Chemical Sciences在 nuigalway.ie 的电子邮件经过验证
Valérie de Crécy-LagardDistinguished Professor, Microbiology and Cell Science Dpt, University of Florida在 ufl.edu 的电子邮件经过验证

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Ines Thiele

University of Galway

在 universityofgalway.ie 的电子邮件经过验证

constraint-based modeling multiscale modeling human metabolism gut microbiome gut-brain-axis


标题按引用次数排序按年份排序按标题排序	引用次数引用次数	年份
What is flux balance analysis? JD Orth, I Thiele, BØ Palsson Nature biotechnology 28 (3), 245-248, 2010	4201	2010
Gut microbiota functions: metabolism of nutrients and other food components I Rowland, G Gibson, A Heinken, K Scott, J Swann, I Thiele, K Tuohy European journal of nutrition 57, 1-24, 2018	2373	2018
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005	2301	2005
A protocol for generating a high-quality genome-scale metabolic reconstruction I Thiele, BØ Palsson Nature protocols 5 (1), 93-121, 2010	1989	2010
Global reconstruction of the human metabolic network based on genomic and bibliomic data NC Duarte, SA Becker, N Jamshidi, I Thiele, ML Mo, TD Vo, R Srivas, ... Proceedings of the National Academy of Sciences 104 (6), 1777-1782, 2007	1658	2007
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2. 0 J Schellenberger, R Que, RMT Fleming, I Thiele, JD Orth, AM Feist, ... Nature protocols 6 (9), 1290-1307, 2011	1657	2011
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	1186	2013
Reconstruction of biochemical networks in microorganisms AM Feist, MJ Herrgård, I Thiele, JL Reed, BØ Palsson Nature Reviews Microbiology 7 (2), 129-143, 2009	1081	2009
Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v. 3.0 L Heirendt, S Arreckx, T Pfau, SN Mendoza, A Richelle, A Heinken, ... Nature protocols 14 (3), 639-702, 2019	1035	2019
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota S Magnúsdóttir, A Heinken, L Kutt, DA Ravcheev, E Bauer, A Noronha, ... Nature biotechnology 35 (1), 81-89, 2017	725	2017
Systematic genome assessment of B-vitamin biosynthesis suggests co-operation among gut microbes S Magnúsdóttir, D Ravcheev, V de Crécy-Lagard, I Thiele Frontiers in genetics 6, 148, 2015	718	2015
Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272-281, 2018	637	2018
Metabolomics enables precision medicine:“a white paper, community perspective” RD Beger, W Dunn, MA Schmidt, SS Gross, JA Kirwan, M Cascante, ... Metabolomics 12, 1-15, 2016	575*	2016
Towards multidimensional genome annotation JL Reed, I Famili, I Thiele, BO Palsson Nature Reviews Genetics 7 (2), 130-141, 2006	451	2006
Computationally efficient flux variability analysis S Gudmundsson, I Thiele BMC bioinformatics 11, 1-3, 2010	428	2010
Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis J Nogales, S Gudmundsson, EM Knight, BO Palsson, I Thiele Proceedings of the National Academy of Sciences 109 (7), 2678-2683, 2012	356	2012
The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease A Noronha, J Modamio, Y Jarosz, E Guerard, N Sompairac, G Preciat, ... Nucleic acids research 47 (D1), D614-D624, 2019	323	2019
A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory J Nogales, B Palsson, I Thiele BMC systems biology 2 (1), 79, 2008	303	2008
Expanded Metabolic Reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an In Silico Genome-Scale Characterization of Single- and Double-Deletion Mutants I Thiele, TD Vo, ND Price, BØ Palsson Journal of bacteriology 187 (16), 5818-5830, 2005	289	2005
Systematic assessment of secondary bile acid metabolism in gut microbes reveals distinct metabolic capabilities in inflammatory bowel disease A Heinken, DA Ravcheev, F Baldini, L Heirendt, RMT Fleming, I Thiele Microbiome 7, 1-18, 2019	280*	2019

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