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Blake G Lindner
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Parallel deployment of passive and composite samplers for surveillance and variant profiling of SARS-CoV-2 in sewage
G Cha, KE Graham, KJ Zhu, G Rao, BG Lindner, K Kocaman, S Woo, ...
Science of The Total Environment 866, 161101, 2023
182023
An ANI gap within bacterial species that advances the definitions of intra-species units
LM Rodriguez-R, RE Conrad, T Viver, DJ Feistel, BG Lindner, SN Venter, ...
Mbio 15 (1), e02696-23, 2024
172024
Fecal microbiota transplantation promotes reduction of antimicrobial resistance by strain replacement
MH Woodworth, RE Conrad, M Haldopoulos, SM Pouch, A Babiker, ...
Science translational medicine 15 (720), eabo2750, 2023
172023
Toward shotgun metagenomic approaches for microbial source tracking sewage spills based on laboratory mesocosms
BG Lindner, B Suttner, KJ Zhu, RE Conrad, LM Rodriguez-R, JK Hatt, ...
Water Research 210, 117993, 2022
112022
A natural definition for a bacterial strain and clonal complex
LM Rodriguez-R, RE Conrad, DJ Feistel, T Viver, R Rossello-Mora, ...
bioRxiv, 2022.06. 27.497766, 2022
52022
A user's guide to the bioinformatic analysis of shotgun metagenomic sequence data for bacterial pathogen detection
BG Lindner, K Gerhardt, DJ Feistel, LM Rodriguez-R, JK Hatt, ...
International Journal of Food Microbiology, 110488, 2023
42023
Metagenome-based comparisons of decay rates and host-specificity of fecal microbial communities for improved microbial source tracking
B Suttner, BG Lindner, M Kim, RE Conrad, LM Rodriguez, LH Orellana, ...
bioRxiv, 2021.06. 17.448865, 2021
22021
Potential routes of plastics biotransformation involving novel plastizymes revealed by global multi-omic analysis of plastic associated microbes
RS Ridley Jr, RE Conrad, BG Lindner, S Woo, KT Konstantinidis
Scientific Reports 14 (1), 8798, 2024
2024
Metagenomic insights into the impact of litter from poultry Concentrated Animal Feeding Operations (CAFOs) to adjacent soil and water microbial communities
A Durán-Viseras, BG Lindner, JK Hatt, A Lai, R Wallace, O Ginn, J Brown, ...
Science of The Total Environment 920, 170772, 2024
2024
Advancing source tracking: systematic review and source-specific genome database curation of fecally shed prokaryotes
BG Lindner, RA Choudhury, P Pinamang, L Bingham, I D'Amico, JK Hatt, ...
bioRxiv, 2024.06. 14.598882, 2024
2024
Genome-centric Insights into Full-scale EBPR Captured During a Biomonitoring Campaign
BG Lindner, B Layton, R Golda, K Lesnik, K Konstantinidis, A Menniti, ...
Proceedings of the Water Environment Federation, 2023
2023
Parallel Deployment of Passive and Automated Samplers in a University Campus for Surveillance and Variant Profiling of SARS-CoV-2 in Sewage Reveals the Usefulness of the Former
G Cha, KE Graham, KJ Zhu, G Rao, B Lindner, K Kocaman, S Woo, ...
2022
Novel municipal sewage-associated bacterial genomes and their potential in source tracking
BG Lindner, B Suttner, RE Conrad, LM Rodriguez-R, JK Hatt, KJ Zhu, ...
bioRxiv, 2021.07. 15.452399, 2021
2021
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