| High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin K Achim, JB Pettit, LR Saraiva, D Gavriouchkina, T Larsson, D Arendt, ... Nature biotechnology 33 (5), 503-509, 2015 | 446 | 2015 |
| Profiling cellular diversity in sponges informs animal cell type and nervous system evolution JM Musser, KJ Schippers, M Nickel, G Mizzon, AB Kohn, C Pape, ... Science 374 (6568), 717-723, 2021 | 196 | 2021 |
| Evolution of neuronal types and families D Arendt, PY Bertucci, K Achim, JM Musser Current opinion in neurobiology 56, 144-152, 2019 | 125 | 2019 |
| Mechanisms regulating GABAergic neuron development K Achim, M Salminen, J Partanen Cellular and molecular life sciences 71, 1395-1415, 2014 | 72 | 2014 |
| The role of Tal2 and Tal1 in the differentiation of midbrain GABAergic neuron precursors K Achim, P Peltopuro, L Lahti, HH Tsai, A Zachariah, M Åstrand, ... Biology open 2 (10), 990-997, 2013 | 66 | 2013 |
| Whole-organism cellular gene-expression atlas reveals conserved cell types in the ventral nerve cord of Platynereis dumerilii HM Vergara, PY Bertucci, P Hantz, MA Tosches, K Achim, P Vopalensky, ... Proceedings of the National Academy of Sciences 114 (23), 5878-5885, 2017 | 65 | 2017 |
| Structural evolution of cell types by step-wise assembly of cellular modules K Achim, D Arendt Current Opinion in Genetics & Development 27, 102-108, 2014 | 61 | 2014 |
| Whole-body single-cell sequencing reveals transcriptional domains in the annelid larval body K Achim, N Eling, HM Vergara, PY Bertucci, J Musser, P Vopalensky, ... Molecular biology and evolution 35 (5), 1047-1062, 2018 | 57 | 2018 |
| Transcriptional regulatory mechanisms underlying the GABAergic neuron fate in different diencephalic prosomeres SM Virolainen, K Achim, P Peltopuro, M Salminen, J Partanen Development 139 (20), 3795-3805, 2012 | 51 | 2012 |
| Distinct developmental origins and regulatory mechanisms for GABAergic neurons associated with dopaminergic nuclei in the ventral mesodiencephalic region K Achim, P Peltopuro, L Lahti, J Li, M Salminen, J Partanen Development 139 (13), 2360-2370, 2012 | 45 | 2012 |
| Gata2 and Gata3 regulate the differentiation of serotonergic and glutamatergic neuron subtypes of the dorsal raphe M Haugas, L Tikker, K Achim, M Salminen, J Partanen Development 143 (23), 4495-4508, 2016 | 38 | 2016 |
| Molecular regulation of GABA ergic neuron differentiation and diversity in the developing midbrain L Lahti, K Achim, J Partanen Acta Physiologica 207 (4), 616-627, 2013 | 37 | 2013 |
| Identifying cell types from spatially referenced single-cell expression datasets JB Pettit, R Tomer, K Achim, S Richardson, L Azizi, J Marioni PLoS computational biology 10 (9), e1003824, 2014 | 25 | 2014 |
| From spiral cleavage to bilateral symmetry: the developmental cell lineage of the annelid brain P Vopalensky, MA Tosches, K Achim, M Handberg-Thorsager, D Arendt BMC biology 17, 1-19, 2019 | 21 | 2019 |
| Molecular fingerprint and developmental regulation of the tegmental GABAergic and glutamatergic neurons derived from the anterior hindbrain F Morello, D Borshagovski, M Survila, L Tikker, S Sadik-Ogli, ... Cell reports 33 (2), 2020 | 20 | 2020 |
| Neurons gating behavior—developmental, molecular and functional features of neurons in the Substantia Nigra pars reticulata J Partanen, K Achim Frontiers in Neuroscience 16, 976209, 2022 | 11 | 2022 |
| Gata2, Nkx2-2 and Skor2 form a transcription factor network regulating development of a midbrain GABAergic neuron subtype with characteristics of REM-sleep regulatory neurons A Kirjavainen, P Singh, L Lahti, P Seja, Z Lelkes, A Makkonen, S Kilpinen, ... Development 149 (14), dev200937, 2022 | 8 | 2022 |
| Spatial transcriptomics: constructing a single-cell resolution transcriptome-wide expression atlas K Achim, HM Vergara, JB Pettit RNA Detection: Methods and Protocols, 111-125, 2018 | 4 | 2018 |
| Whole-body single-cell sequencing of the Platynereis larva reveals a subdivision into apical versus non-apical tissues K Achim, N Eling, H Martinez Vergara, PY Bertucci, T Brunet, P Collier, ... BioRxiv, 167742, 2017 | 3 | 2017 |
| Range of chromatin accessibility configurations are permissive of GABAergic fate acquisition in developing mouse brain S Kilpinen, H Heliölä, K Achim BMC genomics 24 (1), 725, 2023 | 1 | 2023 |
