Structure of the DDB1–CRBN E3 ubiquitin ligase in complex with thalidomide ES Fischer, K Böhm, JR Lydeard, H Yang, MB Stadler, S Cavadini, ... Nature 512 (7512), 49-53, 2014 | 970 | 2014 |
Large-scale prediction and testing of drug activity on side-effect targets E Lounkine, MJ Keiser, S Whitebread, D Mikhailov, J Hamon, JL Jenkins, ... Nature, 2012 | 908 | 2012 |
Integrating high-content screening and ligand-target prediction to identify mechanism of action DW Young, A Bender, J Hoyt, E McWhinnie, GW Chirn, CY Tao, ... Nature chemical biology 4 (1), 59-68, 2008 | 399 | 2008 |
Analysis of pharmacology data and the prediction of adverse drug reactions and off‐target effects from chemical structure A Bender, J Scheiber, M Glick, JW Davies, K Azzaoui, J Hamon, L Urban, ... ChemMedChem: Chemistry Enabling Drug Discovery 2 (6), 861-873, 2007 | 386 | 2007 |
From in silico target prediction to multi-target drug design: Current databases, methods and applications A Koutsoukas, B Simms, J Kirchmair, PJ Bond, AV Whitmore, S Zimmer, ... Journal of proteomics 74 (12), 2554-2574, 2011 | 350 | 2011 |
How similar are similarity searching methods? A principal component analysis of molecular descriptor space A Bender, JL Jenkins, J Scheiber, SCK Sukuru, M Glick, JW Davies Journal of chemical information and modeling 49 (1), 108-119, 2009 | 336 | 2009 |
Prediction of biological targets for compounds using multiple-category Bayesian models trained on chemogenomics databases Nidhi, M Glick, JW Davies, JL Jenkins Journal of chemical information and modeling 46 (3), 1124-1133, 2006 | 332 | 2006 |
Bridging chemical and biological space:“target fishing” using 2D and 3D molecular descriptors JH Nettles, JL Jenkins, A Bender, Z Deng, JW Davies, M Glick Journal of medicinal chemistry 49 (23), 6802-6810, 2006 | 226 | 2006 |
In silico target fishing: Predicting biological targets from chemical structure JL Jenkins, A Bender, JW Davies Drug Discovery Today: Technologies 3 (4), 413-421, 2006 | 213 | 2006 |
Phenotypic landscape of intestinal organoid regeneration I Lukonin, D Serra, L Challet Meylan, K Volkmann, J Baaten, R Zhao, ... Nature 586 (7828), 275-280, 2020 | 206 | 2020 |
Modeling promiscuity based on in vitro safety pharmacology profiling data K Azzaoui, J Hamon, B Faller, S Whitebread, E Jacoby, A Bender, ... ChemMedChem: Chemistry Enabling Drug Discovery 2 (6), 874-880, 2007 | 205 | 2007 |
Mapping adverse drug reactions in chemical space J Scheiber, JL Jenkins, SCK Sukuru, A Bender, D Mikhailov, M Milik, ... Journal of medicinal chemistry 52 (9), 3103-3107, 2009 | 195 | 2009 |
Gaining insight into off-target mediated effects of drug candidates with a comprehensive systems chemical biology analysis J Scheiber, B Chen, M Milik, SCK Sukuru, A Bender, D Mikhailov, ... Journal of chemical information and modeling 49 (2), 308-317, 2009 | 192 | 2009 |
Bivalent sequential binding model of a Bacillus thuringiensis toxin to gypsy moth aminopeptidase N receptor JL Jenkins, MK Lee, AP Valaitis, A Curtiss, DH Dean Journal of Biological Chemistry 275 (19), 14423-14431, 2000 | 176 | 2000 |
DRUG-seq for miniaturized high-throughput transcriptome profiling in drug discovery C Ye, DJ Ho, M Neri, C Yang, T Kulkarni, R Randhawa, M Henault, ... Nature communications 9 (1), 4307, 2018 | 165 | 2018 |
Rethinking molecular similarity: comparing compounds on the basis of biological activity PM Petrone, B Simms, F Nigsch, E Lounkine, P Kutchukian, A Cornett, ... ACS chemical biology 7 (8), 1399-1409, 2012 | 164 | 2012 |
A 3D similarity method for scaffold hopping from known drugs or natural ligands to new chemotypes JL Jenkins, M Glick, JW Davies Journal of medicinal chemistry 47 (25), 6144-6159, 2004 | 161 | 2004 |
Identifying compound efficacy targets in phenotypic drug discovery M Schirle, JL Jenkins Drug discovery today 21 (1), 82-89, 2016 | 156 | 2016 |
A small-molecule inhibitor of the ribonucleolytic activity of human angiogenin that possesses antitumor activity RYT Kao, JL Jenkins, KA Olson, ME Key, JW Fett, R Shapiro Proceedings of the National Academy of Sciences 99 (15), 10066-10071, 2002 | 146 | 2002 |
Streamlining lead discovery by aligning in silico and high-throughput screening JW Davies, M Glick, JL Jenkins Current opinion in chemical biology 10 (4), 343-351, 2006 | 144 | 2006 |