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SHIJIA ZHU
SHIJIA ZHU
Assistant Professor, University of Minnesota Medical School
在 UTSouthwestern.edu 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
DNA methylation on N6-adenine in mammalian embryonic stem cells
TP Wu, T Wang, MG Seetin, Y Lai, S Zhu, K Lin, Y Liu, SD Byrum, ...
Nature 532 (7599), 329-333, 2016
6682016
Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation
J Beaulaurier, S Zhu, G Deikus, I Mogno, XS Zhang, A Davis-Richardson, ...
Nature Biotechnology, 2017
1432017
Dysregulation of miRNA-9 in a subset of schizophrenia patient-derived neural progenitor cells
A Topol, S Zhu, BJ Hartley, J English, ME Hauberg, N Tran, ...
Cell reports 15 (5), 1024-1036, 2016
1332016
Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes
J Beaulaurier, XS Zhang, S Zhu, R Sebra, C Rosenbluh, G Deikus, ...
Nature communications 6 (1), 7438, 2015
1092015
Neuronal impact of patient-specific aberrant NRXN1α splicing
E Flaherty, S Zhu, N Barretto, E Cheng, PJM Deans, MB Fernando, ...
Nature genetics 51 (12), 1679-1690, 2019
1072019
Altered WNT signaling in human induced pluripotent stem cell neural progenitor cells derived from four schizophrenia patients
A Topol, S Zhu, N Tran, A Simone, G Fang, KJ Brennand
Biological psychiatry 78 (6), e29-e34, 2015
952015
Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis
PH Oliveira, JW Ribis, EM Garrett, D Trzilova, A Kim, O Sekulovic, ...
Nature microbiology 5 (1), 166-180, 2020
882020
Mapping and characterizing N6-methyladenine in eukaryotic genomes using single-molecule real-time sequencing
S Zhu, J Beaulaurier, G Deikus, TP Wu, M Strahl, Z Hao, G Luo, ...
Genome research 28 (7), 1067-1078, 2018
792018
Use of big data in drug development for precision medicine: an update
T Qian, S Zhu, Y Hoshida
Expert review of precision medicine and drug development 4 (3), 189-200, 2019
782019
Increased abundance of translation machinery in stem cell–derived neural progenitor cells from four schizophrenia patients
A Topol, JA English, E Flaherty, P Rajarajan, BJ Hartley, S Gupta, ...
Translational psychiatry 5 (10), e662-e662, 2015
742015
A blood-based prognostic liver secretome signature and long-term hepatocellular carcinoma risk in advanced liver fibrosis
N Fujiwara, M Kobayashi, AJ Fobar, A Hoshida, CA Marquez, B Koneru, ...
Med 2 (7), 836-850. e10, 2021
532021
Molecular signatures of long-term hepatocellular carcinoma risk in nonalcoholic fatty liver disease
N Fujiwara, N Kubota, E Crouchet, B Koneru, CA Marquez, AK Jajoriya, ...
Science translational medicine 14 (650), eabo4474, 2022
502022
A cytosine methytransferase modulates the cell envelope stress response in the cholera pathogen
MC Chao, S Zhu, S Kimura, BM Davis, EE Schadt, G Fang, MK Waldor
PLoS genetics 11 (11), e1005666, 2015
452015
Positive selection of somatically mutated clones identifies adaptive pathways in metabolic liver disease
Z Wang, S Zhu, Y Jia, Y Wang, N Kubota, N Fujiwara, R Gordillo, C Lewis, ...
Cell 186 (9), 1968-1984. e20, 2023
232023
Molecular heterogeneity in hepatocellular carcinoma
S Zhu, Y Hoshida
Hepatic oncology 5 (1), HEP10, 2018
232018
Hidden Markov induced Dynamic Bayesian Network for recovering time evolving gene regulatory networks
S Zhu, Y Wang
Scientific reports 5 (1), 17841, 2015
222015
Molecular signature predictive of long-term liver fibrosis progression to inform antifibrotic drug development
T Qian, N Fujiwara, B Koneru, A Ono, N Kubota, AK Jajoriya, MG Tung, ...
Gastroenterology 162 (4), 1210-1225, 2022
202022
Matrix Epistasis: ultrafast, exhaustive epistasis scan for quantitative traits with covariate adjustment
S Zhu, G Fang
Bioinformatics, 2018
162018
Modeling exon expression using histone modifications
S Zhu, G Wang, B Liu, Y Wang
PLoS One 8 (6), e67448, 2013
162013
Chromatin structure characteristics of pre-miRNA genomic sequences
S Zhu, Q Jiang, G Wang, B Liu, M Teng, Y Wang
BMC genomics 12, 1-13, 2011
162011
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