Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.) MFR Resende Jr, P Munoz, MDV Resende, DJ Garrick, RL Fernando, ... Genetics 190 (4), 1503-1510, 2012 | 455 | 2012 |
Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments MFR Resende Jr, P Munoz, JJ Acosta, GF Peter, JM Davis, D Grattapaglia, ... New Phytologist 193 (3), 617-624, 2012 | 323 | 2012 |
Unraveling additive from nonadditive effects using genomic relationship matrices PR Muñoz, MFR Resende Jr, SA Gezan, MDV Resende, ... Genetics 198 (4), 1759-1768, 2014 | 196 | 2014 |
AGHmatrix: R package to construct relationship matrices for autotetraploid and diploid species: a blueberry example RR Amadeu, C Cellon, JW Olmstead, AAF Garcia, MFR Resende Jr, ... The plant genome 9 (3), plantgenome2016.01.0009, 2016 | 192 | 2016 |
Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato JB Endelman, CAS Carley, PC Bethke, JJ Coombs, ME Clough, ... Genetics 209 (1), 77-87, 2018 | 122 | 2018 |
Metabolomic selection for enhanced fruit flavor V Colantonio, LFV Ferrão, DM Tieman, N Bliznyuk, C Sims, HJ Klee, ... Proceedings of the National Academy of Sciences 119 (7), e2115865119, 2022 | 98 | 2022 |
Genomic relationship matrix for correcting pedigree errors in breeding populations: impact on genetic parameters and genomic selection accuracy PR Munoz, MFR Resende Jr, DA Huber, T Quesada, MDV Resende, ... Crop Science 54 (3), 1115-1123, 2014 | 96 | 2014 |
Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species LM Zingaretti, SA Gezan, LFV Ferrão, LF Osorio, A Monfort, PR Muñoz, ... Frontiers in plant science 11, 25, 2020 | 94 | 2020 |
The contribution of dominance to phenotype prediction in a pine breeding and simulated population JE de Almeida Filho, JFR Guimarães, MDV de Resende, P Munoz, M Kirst, ... Heredity 117 (1), 33-41, 2016 | 91 | 2016 |
Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential JW Westbrook, MFR Resende Jr, P Munoz, AR Walker, JL Wegrzyn, ... New Phytologist 199 (1), 89-100, 2013 | 87 | 2013 |
Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of Eucalyptus BSF Müller, LG Neves, JE de Almeida Filho, MFR Resende, PR Muñoz, ... BMC genomics 18, 1-17, 2017 | 83 | 2017 |
Ridge, Lasso and Bayesian additive-dominance genomic models CF Azevedo, MDV de Resende, FF e Silva, JMS Viana, MSF Valente, ... BMC genetics 16, 1-13, 2015 | 76 | 2015 |
Genome‐wide association of volatiles reveals candidate loci for blueberry flavor LFV Ferrão, TS Johnson, J Benevenuto, PP Edger, TA Colquhoun, ... New Phytologist 226 (6), 1725-1737, 2020 | 71 | 2020 |
Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations JW Westbrook, AR Walker, LG Neves, P Munoz, MFR Resende Jr, ... New Phytologist 205 (2), 627-641, 2015 | 64 | 2015 |
Insights into the genetic basis of blueberry fruit-related traits using diploid and polyploid models in a GWAS context LFV Ferrão, J Benevenuto, IB Oliveira, C Cellon, J Olmstead, M Kirst, ... Frontiers in Ecology and Evolution 6, 107, 2018 | 63 | 2018 |
A review for southern highbush blueberry alternative production systems Y Fang, GH Nunez, MN Silva, DA Phillips, PR Munoz Agronomy 10 (10), 1531, 2020 | 61 | 2020 |
Genomic prediction of autotetraploids; influence of relationship matrices, allele dosage, and continuous genotyping calls in phenotype prediction I de Bem Oliveira, MFR Resende Jr, LFV Ferrão, RR Amadeu, ... G3: Genes, Genomes, Genetics 9 (4), 1189-1198, 2019 | 59 | 2019 |
Molecular and genetic bases of fruit firmness variation in blueberry—a review F Cappai, J Benevenuto, LFV Ferrão, P Munoz Agronomy 8 (9), 174, 2018 | 58 | 2018 |
Genome-enabled estimates of additive and nonadditive genetic variances and prediction of apple phenotypes across environments S Kumar, C Molloy, P Muñoz, H Daetwyler, D Chagné, R Volz G3: Genes, Genomes, Genetics 5 (12), 2711-2718, 2015 | 54 | 2015 |
How can a high-quality genome assembly help plant breeders? J Benevenuto, LFV Ferrão, RR Amadeu, P Munoz Gigascience 8 (6), giz068, 2019 | 52 | 2019 |