| De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer D Hernandez, P François, L Farinelli, M Østerås, J Schrenzel Genome research 18 (5), 802-809, 2008 | 811 | 2008 |
| Metagenomic study of the oral microbiota by Illumina high-throughput sequencing V Lazarevic, K Whiteson, S Huse, D Hernandez, L Farinelli, M Østerås, ... Journal of microbiological methods 79 (3), 266-271, 2009 | 428 | 2009 |
| Study of inter-and intra-individual variations in the salivary microbiota V Lazarevic, K Whiteson, D Hernandez, P François, J Schrenzel BMC genomics 11, 1-11, 2010 | 295 | 2010 |
| Methicillin-Resistant Coagulase-Negative Staphylococci in the Community: High Homology of SCCmec IVa between Staphylococcus epidermidis and Major Clones of … F Barbier, E Ruppé, D Hernandez, D Lebeaux, P Francois, B Felix, ... The Journal of infectious diseases 202 (2), 270-281, 2010 | 221 | 2010 |
| Whole-genome sequencing of Staphylococcus aureus strain RN4220, a key laboratory strain used in virulence research, identifies mutations that affect not only virulence factors … D Nair, G Memmi, D Hernandez, J Bard, M Beaume, S Gill, P Francois, ... Journal of bacteriology 193 (9), 2332-2335, 2011 | 216 | 2011 |
| A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains AR Corvaglia, P François, D Hernandez, K Perron, P Linder, J Schrenzel Proceedings of the National Academy of Sciences 107 (26), 11954-11958, 2010 | 160 | 2010 |
| Cartography of Methicillin-Resistant S. aureus Transcripts: Detection, Orientation and Temporal Expression during Growth Phase and Stress Conditions M Beaume, D Hernandez, L Farinelli, C Deluen, P Linder, C Gaspin, ... PLoS One 5 (5), e10725, 2010 | 160 | 2010 |
| Procalcitonin (PCT) levels for ruling-out bacterial coinfection in ICU patients with influenza: a CHAID decision-tree analysis AH Rodríguez, FX Avilés-Jurado, E Díaz, P Schuetz, SI Trefler, ... Journal of infection 72 (2), 143-151, 2016 | 141 | 2016 |
| Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure BP Howden, M Beaume, PF Harrison, D Hernandez, J Schrenzel, ... Antimicrobial agents and chemotherapy 57 (8), 3864-3874, 2013 | 114 | 2013 |
| High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis F Barbier, D Lebeaux, D Hernandez, AS Delannoy, V Caro, P François, ... Journal of Antimicrobial Chemotherapy 66 (1), 29-36, 2011 | 112 | 2011 |
| Impact of oleic acid (cis-9-octadecenoic acid) on bacterial viability and biofilm production in Staphylococcus aureus L Stenz, P François, A Fischer, A Huyghe, M Tangomo, D Hernandez, ... FEMS microbiology letters 287 (2), 149-155, 2008 | 112 | 2008 |
| Molecular Basis of Virulence in Staphylococcus aureus Mastitis C Le Maréchal, N Seyffert, J Jardin, D Hernandez, G Jan, L Rault, ... PLoS One 6 (11), e27354, 2011 | 107 | 2011 |
| Genomic analysis of an emerging multiresistant Staphylococcus aureusstrain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic … JM Rolain, P François, D Hernandez, F Bittar, H Richet, G Fournous, ... Biology direct 4, 1-15, 2009 | 91 | 2009 |
| Analysis of the salivary microbiome using culture-independent techniques V Lazarevic, K Whiteson, N Gaïa, Y Gizard, D Hernandez, L Farinelli, ... Journal of clinical bioinformatics 2, 1-8, 2012 | 89 | 2012 |
| De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads D Hernandez, R Tewhey, JB Veyrieras, L Farinelli, M Østerås, P Francois, ... Bioinformatics 30 (1), 40-49, 2014 | 56 | 2014 |
| Staphylococcus aureus seroproteomes discriminate ruminant isolates causing mild or severe mastitis C Le Maréchal, J Jardin, G Jan, S Even, C Pulido, JM Guibert, ... Veterinary Research 42, 1-20, 2011 | 54 | 2011 |
| Analysis of prophages harbored by the human-adapted subpopulation of Staphylococcus aureus CC398 N Van Der Mee-Marquet, AR Corvaglia, AS Valentin, D Hernandez, ... Infection, Genetics and Evolution 18, 299-308, 2013 | 51 | 2013 |
| Conserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarrays YL Yap, MP Wong, XW Zhang, D Hernandez, R Gras, DK Smith, ... Nucleic acids research 33 (1), 409-421, 2005 | 51 | 2005 |
| Orientation and expression of methicillin-resistant Staphylococcus aureus small RNAs by direct multiplexed measurements using the nCounter of NanoString technology M Beaume, D Hernandez, M Docquier, C Delucinge-Vivier, P Descombes, ... Journal of microbiological methods 84 (2), 327-334, 2011 | 50 | 2011 |
| Fine-tuned characterization of Staphylococcus aureus Newbould 305, a strain associated with mild and chronic mastitis in bovines V Peton, DS Bouchard, S Almeida, L Rault, H Falentin, J Jardin, G Jan, ... Veterinary research 45, 1-15, 2014 | 43 | 2014 |
