Jointly defining cell types from multiple single-cell datasets using LIGER J Liu, C Gao, J Sodicoff, V Kozareva, EZ Macosko, JD Welch Nature protocols 15 (11), 3632-3662, 2020 | 112 | 2020 |
Iterative single-cell multi-omic integration using online learning C Gao, J Liu, AR Kriebel, S Preissl, C Luo, R Castanon, J Sandoval, ... Nature biotechnology 39 (8), 1000-1007, 2021 | 62 | 2021 |
G-CSF secreted by mutant IDH1 glioma stem cells abolishes myeloid cell immunosuppression and enhances the efficacy of immunotherapy MS Alghamri, BL McClellan, RP Avvari, R Thalla, S Carney, CS Hartlage, ... Science Advances 7 (40), eabh3243, 2021 | 58 | 2021 |
Bone marrow endosteal stem cells dictate active osteogenesis and aggressive tumorigenesis Y Matsushita, J Liu, AKY Chu, C Tsutsumi-Arai, M Nagata, Y Arai, W Ono, ... Nature Communications 14 (1), 2383, 2023 | 17 | 2023 |
Mapping Cell Fate Transition in Space and Time Y Gu, J Liu, C Li, JD Welch International Conference on Research in Computational Molecular Biology, 417-420, 2024 | | 2024 |
Endosteal stem cells at the bone‐blood interface: A double‐edged sword for rapid bone formation: Bone marrow endosteal stem cells provide a robust source of bone‐making … Y Matsushita, J Liu, AKY Chu, W Ono, JD Welch, N Ono BioEssays 46 (3), 2300173, 2024 | | 2024 |
CytoSignal Detects Locations and Dynamics of Ligand-Receptor Signaling at Cellular Resolution from Spatial Transcriptomic Data J Liu, H Manabe, W Qian, Y Wang, Y Gu, AKY Chu, G Gadhvi, Y Song, ... bioRxiv, 2024.03. 08.584153, 2024 | | 2024 |
CytoSimplex: Visualizing Single-cell Fates and Transitions on a Simplex J Liu, Y Wang, C Li, Y Gu, N Ono, JD Welch bioRxiv, 2023.12. 07.570655, 2023 | | 2023 |