SquiggleNet: real-time, direct classification of nanopore signals Y Bao, J Wadden, JR Erb-Downward, P Ranjan, W Zhou, TL McDonald, ... Genome biology 22, 1-16, 2021 | 57 | 2021 |
Cas9 targeted enrichment of mobile elements using nanopore sequencing TL McDonald, W Zhou, CP Castro, C Mumm, JA Switzenberg, RE Mills, ... Nature communications 12 (1), 3586, 2021 | 54 | 2021 |
Multiplexed long-read plasmid validation and analysis using OnRamp C Mumm, ML Drexel, TL McDonald, AG Diehl, JA Switzenberg, AP Boyle Genome Research 33 (5), 741-749, 2023 | 5 | 2023 |
OnRamp: rapid nanopore plasmid validation C Mumm, ML Drexel, TL McDonald, AG Diehl, JA Switzenberg, AP Boyle | 2 | 2022 |
The Inducible lac Operator-Repressor System Is Functional in Zebrafish Cells SS Nishizaki, TL McDonald, GA Farnum, MJ Holmes, ML Drexel, ... Frontiers in Genetics 12, 683394, 2021 | 1 | 2021 |
TEnCATS-Transposable Element nanopore Cas9-Targeted Sequencing T McDonald, C Mumm, J Switzenberg, A Boyle | | 2024 |
A personalized multi-platform assessment of somatic mosaicism in the human frontal cortex W Zhou, C Mumm, Y Gan, JA Switzenberg, J Wang, P De Oliveira, ... bioRxiv, 2024.12. 18.629274, 2024 | | 2024 |
Endogenous retrotransposons cause catastrophic deoxyribonucleic acid damage in human trophoblasts M Mauro, S Wei, A Breborowicz, X Li, C Bognanni, Z Fuller, T Philipp, ... F&S Science 4 (3), 200-210, 2023 | | 2023 |