COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ... Nature 595 (7865), 107-113, 2021 | 631 | 2021 |
Genome-wide enhancer maps link risk variants to disease genes J Nasser, DT Bergman, CP Fulco, P Guckelberger, BR Doughty, ... Nature 593 (7858), 238-243, 2021 | 395 | 2021 |
Photochemical Modulation of Biosafe Manganese Nanoparticles on Vigna radiata: A Detailed Molecular, Biochemical, and Biophysical Study S Pradhan, P Patra, S Das, S Chandra, S Mitra, KK Dey, S Akbar, P Palit, ... Environmental Science & Technology 47 (22), 13122-13131, 2013 | 345 | 2013 |
Visualizing the structure of RNA-seq expression data using grade of membership models KK Dey, CJ Hsiao, M Stephens PLoS genetics 13 (3), e1006599, 2017 | 168 | 2017 |
Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements T Amariuta, K Ishigaki, H Sugishita, T Ohta, M Koido, KK Dey, K Matsuda, ... Nature genetics 52 (12), 1346-1354, 2020 | 151 | 2020 |
Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia JH Marcus, C Posth, H Ringbauer, L Lai, R Skeates, C Sidore, J Beckett, ... Nature communications 11 (1), 939, 2020 | 133 | 2020 |
Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge AL Tarca, M Lauria, M Unger, E Bilal, S Boue, K Kumar Dey, J Hoeng, ... Bioinformatics 29 (22), 2892-2899, 2013 | 133 | 2013 |
Manganese nanoparticles: impact on non-nodulated plant as a potent enhancer in nitrogen metabolism and toxicity study both in vivo and in vitro S Pradhan, P Patra, S Mitra, KK Dey, S Jain, S Sarkar, S Roy, P Palit, ... Journal of agricultural and food chemistry 62 (35), 8777-8785, 2014 | 117 | 2014 |
Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics KA Jagadeesh, KK Dey, DT Montoro, R Mohan, S Gazal, JM Engreitz, ... Nature genetics 54 (10), 1479-1492, 2022 | 90 | 2022 |
Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity S Gazal, O Weissbrod, F Hormozdiari, KK Dey, J Nasser, KA Jagadeesh, ... Nature Genetics 54 (6), 827-836, 2022 | 87 | 2022 |
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis CJ Hsiao, PY Tung, JD Blischak, JE Burnett, KA Barr, KK Dey, ... Genome research 30 (4), 611-621, 2020 | 71 | 2020 |
Polygenic architecture of rare coding variation across 394,783 exomes DJ Weiner, A Nadig, KA Jagadeesh, KK Dey, BM Neale, EB Robinson, ... Nature 614 (7948), 492-499, 2023 | 70 | 2023 |
Copper Nanoparticle (CuNP) Nanochain Arrays with a Reduced Toxicity Response: A Biophysical and Biochemical Outlook on Vigna radiata S Pradhan, P Patra, S Mitra, KK Dey, S Basu, S Chandra, P Palit, ... Journal of agricultural and food chemistry 63 (10), 2606-2617, 2015 | 68 | 2015 |
Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data MJ Zhang, K Hou, KK Dey, S Sakaue, KA Jagadeesh, K Weinand, ... Nature genetics 54 (10), 1572-1580, 2022 | 63 | 2022 |
SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests W Zhou, W Bi, Z Zhao, KK Dey, KA Jagadeesh, KJ Karczewski, MJ Daly, ... Nature genetics 54 (10), 1466-1469, 2022 | 45 | 2022 |
A new sequence logo plot to highlight enrichment and depletion KK Dey, D Xie, M Stephens BMC bioinformatics 19, 1-9, 2018 | 45 | 2018 |
Microwave synthesis of ZnO@ mSiO2 for detailed antifungal mode of action study: understanding the insights into oxidative stress S Mitra, P Patra, S Pradhan, N Debnath, KK Dey, S Sarkar, ... Journal of colloid and interface science 444, 97-108, 2015 | 44 | 2015 |
Regional influences on community structure across the tropical-temperate divide AE White, KK Dey, D Mohan, M Stephens, TD Price Nature Communications 10 (1), 2646, 2019 | 41 | 2019 |
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ... Biorxiv, 2021 | 40 | 2021 |
Evaluating the informativeness of deep learning annotations for human complex diseases KK Dey, B Van de Geijn, SS Kim, F Hormozdiari, DR Kelley, AL Price Nature communications 11 (1), 4703, 2020 | 32 | 2020 |