| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 395 | 2018 |
| Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data AKRTVSCCDJCJPTDVMFTTKADUBKADTKMJLWSLJCMWNMFNMMPNCBSJMJVJRMMAMAPSC Schürer Nucleic Acids Research 46 (D1), D558-D566, 2018 | 170 | 2018 |
| GREIN: an interactive web platform for re-analyzing GEO RNA-seq data NA Mahi, MF Najafabadi, M Pilarczyk, M Kouril, M Medvedovic Scientific reports 9 (1), 7580, 2019 | 161 | 2019 |
| LINCS Data Portal 2.0: next generation access point for perturbation-response signatures V Stathias, J Turner, A Koleti, D Vidovic, D Cooper, M Fazel-Najafabadi, ... Nucleic acids research 48 (D1), D431-D439, 2020 | 136 | 2020 |
| Connecting omics signatures and revealing biological mechanisms with iLINCS M Pilarczyk, M Fazel-Najafabadi, M Kouril, B Shamsaei, J Vasiliauskas, ... Nature communications 13 (1), 4678, 2022 | 82* | 2022 |
| piNET: a versatile web platform for downstream analysis and visualization of proteomics data B Shamsaei, S Chojnacki, M Pilarczyk, M Najafabadi, W Niu, C Chen, ... Nucleic acids research 48 (W1), W85-W93, 2020 | 25 | 2020 |
| Genetic mapping of resistance to Diuraphis noxia (Kurdjumov) biotype 2 in wheat (Triticum aestivum L.) accession CI2401 M Fazel-Najafabadi, J Peng, FB Peairs, H Simkova, A Kilian, NLV Lapitan Euphytica 203, 607-614, 2015 | 25 | 2015 |
| Lupus Susceptibility Region Containing CDKN1B rs34330 Mechanistically Influences Expression and Function of Multiple Target Genes, Also Linked to … B Singh, GP Maiti, X Zhou, M Fazel‐Najafabadi, SC Bae, C Sun, C Terao, ... Arthritis & Rheumatology 73 (12), 2303-2313, 2021 | 15 | 2021 |
| Genetic analysis of seedling characters in bread wheat MF Najafabadi, MR Ghanadha, AA Zali, SB Yazdi Proceedings of the 4th International Crop Science Congress, Brisbane …, 2004 | 9 | 2004 |
| Inheritance of some traits in bread wheat using diallel method at normal and drought stress conditions H Ramshini, M Fazel Najafabadi, MR Bihamte Cereal Research 2 (1), 1-15, 2012 | 7 | 2012 |
| Connecting omics signatures of diseases, drugs, and mechanisms of actions with iLINCS. bioRxiv, 826271 M Pilarczyk, MF Najafabadi, M Kouril, J Vasiliauskas, W Niu, B Shamsaei, ... | 6 | 2019 |
| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations. Cell Syst 2018; 6: 13–24 AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Duan, Q., Flynn, C., Niepel, M., Hafner, M., Muhlich, JL, Fernandez, NF …, 2014 | 6 | 2014 |
| Connecting omics signatures of diseases, drugs, and mechanisms of actions with iLINCS. 2019; bioRxiv doi: 31 October 2019, preprint: not peer reviewedhttps M Pilarczyk, MF Najafabadi, M Kouril, J Vasiliauskas, W Niu, B Shamsaei, ... doi. org/10.1101/826271, 0 | 6 | |
| Evaluation of drought tolerance in wheat genotypes under drought stress at germination stage E Shirazi, B Fazeli-nasab, HA Ramshin, M Fazel-Najaf-Abadi, ... Journal of Crop Breeding 8 (20), 207-219, 2016 | 5 | 2016 |
| Discovery and functional characterization of two regulatory variants underlying lupus susceptibility at 2p13. 1 M Fazel-Najafabadi, HR Rallabandi, MK Singh, GP Maiti, J Morris, ... Genes 13 (6), 1016, 2022 | 4 | 2022 |
| A study of barley (Hordeum vulgare L.) yield determining traits in stress and non-stress conditions NM FAZEL, MR Bihamta, HR Nikkhah, SA Peighambari IRANIAN JOURNAL OF FIELD CROP SCIENCE (IRANIAN JOURNAL OF AGRICULTURAL …, 2009 | 4 | 2009 |
| The effect of salinity on antioxidant enzyme activity in bread wheat genotypes SF Moghadam, M Ebrahimi, MF Najafabadi, H Ramshini, SAS Noori, ... The first international conference on new ideas in agriculture. Islamic Azad …, 2014 | 3 | 2014 |
| A multilayered post-GWAS analysis pipeline defines functional variants and target genes for systemic lupus erythematosus (SLE) M Fazel-Najafabadi, LL Looger, H Reddy-Rallabandi, SK Nath medRxiv, 2023.04. 07.23288295, 2023 | 1 | 2023 |
| Accelerating drug discovery and repurposing by combining transcriptional signature connectivity with docking AW Thorman, J Reigle, S Chutipongtanate, B Shamsaei, M Pilarczyk, ... bioRxiv, 2020.11. 25.399238, 2020 | 1 | 2020 |
| Studying the relationship between root traits and seed yield in bread wheat (Triticum aestivum L.) under normal and terminal drought stress conditions E Kolahian Hamedanizad, H Ramshini, MG Ghaderi, M Fazel Najafabadi Environmental Stresses in Crop Sciences 8 (1), 1-11, 2015 | 1 | 2015 |
