Transgenerational epigenetic inheritance of longevity in Caenorhabditis elegans EL Greer, TJ Maures, D Ucar, AG Hauswirth, E Mancini, JP Lim, ... Nature 479 (7373), 365-371, 2011 | 696 | 2011 |
An event-based framework for characterizing the evolutionary behavior of interaction graphs S Asur, S Parthasarathy, D Ucar ACM Transactions on Knowledge Discovery from Data (TKDD) 3 (4), 1-36, 2009 | 570 | 2009 |
H3K4me3 breadth is linked to cell identity and transcriptional consistency BA Benayoun, EA Pollina, D Ucar, S Mahmoudi, K Karra, ED Wong, ... Cell 158 (3), 673-688, 2014 | 498 | 2014 |
Sexual-dimorphism in human immune system aging EJ Márquez, C Chung, R Marches, RJ Rossi, D Nehar-Belaid, A Eroglu, ... Nature communications 11 (1), 751, 2020 | 395 | 2020 |
An ensemble framework for clustering protein–protein interaction networks S Asur, D Ucar, S Parthasarathy Bioinformatics 23 (13), i29-i40, 2007 | 264 | 2007 |
A CD4+ T cell population expanded in lupus blood provides B cell help through interleukin-10 and succinate S Caielli, DT Veiga, P Balasubramanian, S Athale, B Domic, E Murat, ... Nature medicine 25 (1), 75-81, 2019 | 225 | 2019 |
Discover regulatory DNA elements using chromatin signatures and artificial neural network HA Firpi, D Ucar, K Tan Bioinformatics 26 (13), 1579-1586, 2010 | 189 | 2010 |
Expansion of oligodendrocyte progenitor cells following SIRT1 inactivation in the adult brain VA Rafalski, PP Ho, JO Brett, D Ucar, JC Dugas, EA Pollina, LML Chow, ... Nature cell biology 15 (6), 614-624, 2013 | 175 | 2013 |
Sestrins induce natural killer function in senescent-like CD8+ T cells BI Pereira, RPH De Maeyer, LP Covre, D Nehar-Belaid, A Lanna, S Ward, ... Nature immunology 21 (6), 684-694, 2020 | 168 | 2020 |
The chromatin accessibility signature of human immune aging stems from CD8+ T cells D Ucar, EJ Márquez, CH Chung, R Marches, RJ Rossi, A Uyar, TC Wu, ... Journal of Experimental Medicine 214 (10), 3123-3144, 2017 | 161 | 2017 |
FOXO3 shares common targets with ASCL1 genome-wide and inhibits ASCL1-dependent neurogenesis AE Webb, EA Pollina, T Vierbuchen, N Urban, D Ucar, DS Leeman, ... Cell reports 4 (3), 477-491, 2013 | 156 | 2013 |
FoxO6 regulates memory consolidation and synaptic function DAM Salih, AJ Rashid, D Colas, L de la Torre-Ubieta, RP Zhu, AA Morgan, ... Genes & development 26 (24), 2780-2801, 2012 | 142 | 2012 |
Markov clustering of protein interaction networks with improved balance and scalability V Satuluri, S Parthasarathy, D Ucar Proceedings of the first ACM international conference on bioinformatics and …, 2010 | 118 | 2010 |
The tandem duplicator phenotype as a distinct genomic configuration in cancer F Menghi, K Inaki, XY Woo, PA Kumar, KR Grzeda, A Malhotra, V Yadav, ... Proceedings of the National Academy of Sciences 113 (17), E2373-E2382, 2016 | 101 | 2016 |
The lethal sex gap: COVID-19 EJ Márquez, J Trowbridge, GA Kuchel, J Banchereau, D Ucar Immunity & Ageing 17, 1-8, 2020 | 96 | 2020 |
Combinatorial chromatin modification patterns in the human genome revealed by subspace clustering D Ucar, Q Hu, K Tan Nucleic acids research 39 (10), 4063-4075, 2011 | 83 | 2011 |
Improving functional modularity in protein-protein interactions graphs using hub-induced subgraphs D Ucar, S Asur, U Catalyurek, S Parthasarathy European Conference on Principles of Data Mining and Knowledge Discovery …, 2006 | 74 | 2006 |
Multiomic profiling identifies cis-regulatory networks underlying human pancreatic β cell identity and function N Lawlor, EJ Marquez, P Orchard, N Narisu, MS Shamim, A Thibodeau, ... Cell reports 26 (3), 788-801. e6, 2019 | 72 | 2019 |
Type 2 diabetes–associated genetic variants regulate chromatin accessibility in human islets S Khetan, R Kursawe, A Youn, N Lawlor, A Jillette, EJ Marquez, D Ucar, ... Diabetes 67 (11), 2466-2477, 2018 | 70 | 2018 |
Genomics of islet (dys) function and type 2 diabetes N Lawlor, S Khetan, D Ucar, ML Stitzel Trends in Genetics 33 (4), 244-255, 2017 | 69 | 2017 |