| Path2Surv: Pathway/gene set-based survival analysis using multiple kernel learning O Dereli, C Oğuz, M Gönen Bioinformatics 35 (24), 5137-5145, 2019 | 19 | 2019 |
| A multitask multiple kernel learning algorithm for survival analysis with application to cancer biology O Dereli, C Oğuz, M Gönen International conference on machine learning, 1576-1585, 2019 | 16 | 2019 |
| PHACT: Phylogeny-aware computing of tolerance for missense mutations N Kuru, O Dereli, E Akkoyun, A Bircan, O Tastan, O Adebali Molecular Biology and Evolution 39 (6), msac114, 2022 | 10 | 2022 |
| Downregulated NPAS4 in multiple brain regions is associated with major depressive disorder B Selçuk, T Aksu, O Dereli, O Adebali Scientific Reports 13 (1), 21596, 2023 | 3 | 2023 |
| Evolutionary history of calcium-sensing receptors unveils hyper/hypocalcemia-causing mutations A Bircan, N Kuru, O Dereli, B Selçuk, O Adebali PLOS Computational Biology 20 (11), e1012591, 2024 | 1 | 2024 |
| PHACTboost: a phylogeny-aware pathogenicity predictor for missense mutations via boosting O Dereli, N Kuru, E Akkoyun, A Bircan, O Tastan, O Adebali Molecular Biology and Evolution 41 (7), msae136, 2024 | 1 | 2024 |
| Evolutionary History of Calcium-Sensing Receptors Unveils Hyper/Hypocalcemia-Causing Mutations A Bircan, N Kuru, O Dereli, B Selçuk, O Adebali bioRxiv, 2023.06. 11.544489, 2023 | 1 | 2023 |
| Assessing predictions on fitness effects of missense variants in HMBS in CAGI6 J Zhang, L Kinch, P Katsonis, O Lichtarge, M Jagota, YS Song, Y Sun, ... Human genetics, 1-17, 2024 | | 2024 |
| PHACTboost predictions N Kuru, O Dereli, E Akkoyun, A Bircan, O Tastan, O Adebali | | 2024 |
| [DATASET] PHACT: Phylogeny-Aware Computing of Tolerance for Missense Mutations N Kuru, O Dereli, E Akkoyun, A Bircan, O Tastan, O Adebali | | 2022 |
| Reproducible and scalable data analysis on high performance computing E Akkoyun, N Kuru, O Dereli, A Bircan, Ö Taştan, O Adebali 15th International Symposium on Health Informatics and Bioinformatics HIBIT …, 2022 | | 2022 |
| Optimization Models for Survival Analysis to Identify Key Gene Sets in Cancer O Dereli Koc University, 2020 | | 2020 |
