| SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ... Journal of computational biology 19 (5), 455-477, 2012 | 24001 | 2012 |
| Differential responses to lithium in hyperexcitable neurons from patients with bipolar disorder J Mertens, QW Wang, Y Kim, DX Yu, S Pham, B Yang, Y Zheng, ... Nature 527 (7576), 95-99, 2015 | 542 | 2015 |
| Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons SR Krishnaswami, RV Grindberg, M Novotny, P Venepally, B Lacar, ... Nature protocols 11 (3), 499-524, 2016 | 453 | 2016 |
| Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ... Nature genetics 50 (11), 1574-1583, 2018 | 227 | 2018 |
| Ragout—a reference-assisted assembly tool for bacterial genomes M Kolmogorov, B Raney, B Paten, S Pham Bioinformatics 30 (12), i302-i309, 2014 | 206 | 2014 |
| ExSPAnder: a universal repeat resolver for DNA fragment assembly AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ... Bioinformatics 30 (12), i293-i301, 2014 | 137 | 2014 |
| Sibelia: a scalable and comprehensive synteny block generation tool for closely related microbial genomes I Minkin, A Patel, M Kolmogorov, N Vyahhi, S Pham Algorithms in Bioinformatics: 13th International Workshop, WABI 2013, Sophia …, 2013 | 136 | 2013 |
| Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers P Medvedev, S Pham, M Chaisson, G Tesler, P Pevzner Journal of Computational Biology 18 (11), 1625-1634, 2011 | 121 | 2011 |
| Chromosome assembly of large and complex genomes using multiple references M Kolmogorov, J Armstrong, BJ Raney, I Streeter, M Dunn, F Yang, ... Genome research 28 (11), 1720-1732, 2018 | 117 | 2018 |
| TwoPaCo: an efficient algorithm to build the compacted de Bruijn graph from many complete genomes I Minkin, S Pham, P Medvedev Bioinformatics 33 (24), 4024-4032, 2017 | 117 | 2017 |
| DRIMM-Synteny: decomposing genomes into evolutionary conserved segments SK Pham, PA Pevzner Bioinformatics 26 (20), 2509-2516, 2010 | 106 | 2010 |
| Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range … Z Chen, L Pham, TC Wu, G Mo, Y Xia, PL Chang, D Porter, T Phan, H Che, ... Genome research 30 (6), 898-909, 2020 | 101 | 2020 |
| Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes D Thybert, M Roller, FCP Navarro, I Fiddes, I Streeter, C Feig, ... Genome research 28 (4), 448-459, 2018 | 99 | 2018 |
| Cerulean: a hybrid assembly using high throughput short and long reads V Deshpande, EDK Fung, S Pham, V Bafna Algorithms in Bioinformatics: 13th International Workshop, WABI 2013, Sophia …, 2013 | 67 | 2013 |
| Pagerank based clustering of hypertext document collections K Avrachenkov, V Dobrynin, D Nemirovsky, SK Pham, E Smirnova Proceedings of the 31st annual international ACM SIGIR conference on …, 2008 | 63 | 2008 |
| Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling ES Rice, S Kohno, JS John, S Pham, J Howard, LF Lareau, BL O'Connell, ... Genome research 27 (5), 686-696, 2017 | 47 | 2017 |
| BBrowser: Making single-cell data easily accessible T Le, T Phan, M Pham, D Tran, L Lam, T Nguyen, T Truong, H Vuong, ... BioRxiv, 2020.12. 11.414136, 2020 | 45 | 2020 |
| C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison I Minkin, H Pham, E Starostina, N Vyahhi, S Pham F1000Research 2, 2013 | 32 | 2013 |
| Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly SK Pham, D Antipov, A Sirotkin, G Tesler, PA Pevzner, MA Alekseyev Journal of Computational Biology 20 (4), 359-371, 2013 | 28 | 2013 |
| Automated multiple peptide synthesis: Improvements in obtaining quality peptides T LUU, SON PHAM, S DESHPANDE International Journal of Peptide and Protein Research 47 (1‐2), 91-97, 1996 | 21 | 1996 |
Pavel PevznerUniversity of California at San Diego在 ucsd.edu 的电子邮件经过验证
