| The Alazami syndrome-associated protein LARP7 guides U6 small nuclear RNA modification and contributes to splicing robustness D Hasler, R Meduri, M Bąk, G Lehmann, L Heizinger, X Wang, ZT Li, ... Molecular cell 77 (5), 1014-1031. e13, 2020 | 55 | 2020 |
| Differential inflammatory microRNA and cytokine expression in pulmonary sarcoidosis A Jazwa, L Kasper, M Bak, M Sobczak, K Szade, A Jozkowicz, K Sladek, ... Archivum immunologiae et therapiae experimentalis 63, 139-146, 2015 | 49 | 2015 |
| Host Taxon Predictor - A Tool for Predicting Taxon of the Host of a Newly Discovered Virus W Gałan, M Bąk, M Jakubowska Scientific Reports 9 (1), 3436, 2019 | 35 | 2019 |
| CFIm-mediated alternative polyadenylation remodels cellular signaling and miRNA biogenesis S Ghosh, M Ataman, M Bak, A Börsch, A Schmidt, K Buczak, G Martin, ... Nucleic acids research 50 (6), 3096-3114, 2022 | 24 | 2022 |
| The methylation status of the chemerin promoter region located from− 252 to+ 258 bp regulates constitutive but not acute-phase cytokine-inducible chemerin expression levels K Kwiecien, P Brzoza, M Bak, P Majewski, I Skulimowska, K Bednarczyk, ... Scientific reports 10 (1), 13702, 2020 | 12 | 2020 |
| Involvement of microRNAs in the inflammatory pathways of pulmonary sarcoidosis M Bak, A Jazwa, L Kasper, N Kachamakova-Trojanowska, A Jozkowicz, ... J Physiol Pharmacol 66 (5), 635-642, 2015 | 11 | 2015 |
| MAPP unravels frequent co-regulation of splicing and polyadenylation by RNA-binding proteins and their dysregulation in cancer M Bak, E van Nimwegen, IU Kouzel, T Gur, R Schmidt, M Zavolan, ... Nature Communications 15 (1), 4110, 2024 | 7 | 2024 |
| ZARP: An automated workflow for processing of RNA-seq data M Katsantoni, F Gypas, CJ Herrmann, D Burri, M Bak, P Iborra, K Agarwal, ... bioRxiv, 2021.11. 18.469017, 2021 | 6 | 2021 |
| Frequent co-regulation of splicing and polyadenylation by RNA-binding proteins inferred with MAPP M Bak, E van Nimwegen, R Schmidt, M Zavolan, AJ Gruber bioRxiv, 2022.01. 09.475576, 2022 | 4 | 2022 |
| Warlock: an automated computational workflow for simulating spatially structured tumour evolution M Bak, B Colyer, V Manojlović, R Noble arXiv preprint arXiv:2301.07808, 2023 | 3 | 2023 |
| ZARP: A user-friendly and versatile RNA-seq analysis workflow M Katsantoni, F Gypas, CJ Herrmann, D Burri, M Bąk, P Iborra, K Agarwal, ... F1000Research 13, 533, 2024 | 1 | 2024 |
| A seven‐step guide to spatial, agent‐based modelling of tumour evolution B Colyer, M Bak, D Basanta, R Noble Evolutionary Applications 17 (5), e13687, 2024 | 1 | 2024 |
| Moran Pycess: a Python package to simulate Moran processes driven by game theory M Bak, AM Rozlach Journal of Open Source Software 5 (54), 2643, 2020 | 1 | 2020 |
| Selective sweep probabilities in spatially expanding populations A Stein, R Kizhuttil, M Bak, R Noble Biorxiv, 2023 | | 2023 |
| Hypercomplex: abstract & fast header-only C++ template library for lattice-based cryptosystems in high-dimensional algebras M Bak Journal of Open Source Software 8 (85), 5272, 2023 | | 2023 |
| Alternative splicing is not a key source of chemerin isoforms diversity K Kwiecien, P Majewski, M Bak, P Brzoza, U Godlewska, I Skulimowska, ... Molecular Biology Reports 50 (3), 2521-2529, 2023 | | 2023 |
| Modeling microbial communities with evolutionary game theory M Bak, R Anna Journal of Brief Ideas, 2023 | | 2023 |
| Identification, Characterization, and Tissue Expression Pattern of Alternatively Spliced Transcript Variants of Mouse RARRES2 Gene K Kwiecien, P Majewski, M Bak, P Brzoza, U Godlewska, I Skulimowska, ... | | 2021 |
| Computational analyses of RNA-Sequencing data to identify splicing and polyadenylation regulatory elements M Bak University_of_Basel, 2021 | | 2021 |
| Rola białka c-MYC w reprogramowaniu komórek somatycznych M Bąk | | 2013 |
