History, discovery, and classification of lncRNAs J Jarroux, A Morillon, M Pinskaya Long non coding RNA biology, 1-46, 2017 | 842 | 2017 |
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue SA Hardwick, W Hu, A Joglekar, L Fan, PG Collier, C Foord, J Balacco, ... Nature biotechnology 40 (7), 1082-1092, 2022 | 69 | 2022 |
Accurate isoform discovery with IsoQuant using long reads AD Prjibelski, A Mikheenko, A Joglekar, A Smetanin, J Jarroux, ... Nature Biotechnology 41 (7), 915-918, 2023 | 44 | 2023 |
Long non coding RNA biology J Jarroux, A Morillon, M Pinskaya Adv. Exp. Med. Biol 1008, 1-46, 2017 | 30 | 2017 |
HOTAIR lncRNA promotes epithelial–mesenchymal transition by redistributing LSD1 at regulatory chromatin regions J Jarroux, D Foretek, C Bertrand, M Gabriel, U Szachnowski, Z Saci, ... EMBO reports 22 (7), e50193, 2021 | 28 | 2021 |
The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing C Foord, J Hsu, J Jarroux, W Hu, N Belchikov, S Pollard, Y He, A Joglekar, ... nature methods 20 (1), 20-24, 2023 | 14 | 2023 |
From words to complete phrases: insight into single-cell isoforms using short and long reads A Joglekar, C Foord, J Jarroux, S Pollard, HU Tilgner Transcription 14 (3-5), 92-104, 2023 | 7 | 2023 |
Comparing 10x Genomics single-cell 3’and 5’assay in short-and long-read sequencing J Hsu, J Jarroux, A Joglekar, JP Romero, C Nemec, D Reyes, A Royall, ... BioRxiv, 2022.10. 27.514084, 2022 | 4 | 2022 |
IsoQuant: a tool for accurate novel isoform discovery with long reads A Prjibelski, A Mikheenko, A Joglekar, A Smetanin, J Jarroux, A Lapidus, ... | 2 | 2022 |
Single-nuclei isoform RNA sequencing reveals combination patterns of transcript elements across human brain cell types SA Hardwick, W Hu, A Joglekar, L Fan, PG Collier, C Foord, J Balacco, ... bioRxiv, 2021.12. 29.474385, 2021 | 1 | 2021 |
ScISOr-ATAC reveals convergent and divergent splicing and chromatin specificities between matched cell types across cortical regions, evolution, and in Alzheimer’s Disease W Hu, C Foord, J Hsu, L Fan, MJ Corley, TN Bhatia, S Xu, N Belchikov, ... bioRxiv, 2024 | | 2024 |
Accumulation of lncRNAs in cytoplasm upon DIS3 depletion leads to production of cryptic peptides detected in Multiple Myeloma. D Foretek, M Gabriel, I Hatin, J Jarroux, M Pinskaya, E Pepermans, ... | | 2024 |
DIS3 ribonuclease prevents the cytoplasmic accumulation of lncRNAs carrying non-canonical ORFs. D Foretek, M Gabriel, I Hatin, J Jarroux, M Pinskaya, E Pepermans, ... | | 2023 |
DIS3 ribonuclease prevents the cytoplasmic accumulation of lncRNAs carrying non-canonical ORFs, which represent a source of cancer immunopeptides. D Foretek, M Gabriel, I Hatin, J Jarroux, M Pinskaya, E Pepermans, ... | | 2023 |
Functional characterization of long non-coding RNAs associated with the epithelial-to-mesenchymal transition J Jarroux Université Paris sciences et lettres, 2019 | | 2019 |
Caractérisation fonctionnelle des longs ARN non codants associés à la transition épithélio-mésenchymateuse| Theses. fr J Jarroux Paris Sciences et Lettres (ComUE), 2019 | | 2019 |
HOTAIR promotes an epithelial-to-mesenchymal transition through relocation of the histone demethylase Lsd1 J Jarroux, C Bertrand, M Gabriel, D Foretek, Z Saci, A Londoño-Valejo, ... bioRxiv, 724948, 2019 | | 2019 |