Genetic effects on gene expression across human tissues. F Aguet, AA Brown, SE Castel, JR Davis, P Mohammadi, AV Segrè, ... Nature 550 (7675), 204-213, 2017 | 3407 | 2017 |
The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020 | 2652 | 2020 |
RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond SE Castel, RA Martienssen Nature Reviews Genetics 14 (2), 100-112, 2013 | 1128 | 2013 |
Landscape of X chromosome inactivation across human tissues T Tukiainen, AC Villani, A Yen, MA Rivas, JL Marshall, R Satija, M Aguirre, ... Nature 550 (7675), 244-248, 2017 | 858 | 2017 |
The impact of sex on gene expression across human tissues M Oliva, M Muñoz-Aguirre, S Kim-Hellmuth, V Wucher, ADH Gewirtz, ... Science 369 (6509), eaba3066, 2020 | 720 | 2020 |
Dynamic landscape and regulation of RNA editing in mammals MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ... Nature 550 (7675), 249-254, 2017 | 540 | 2017 |
Tools and best practices for data processing in allelic expression analysis SE Castel, A Levy-Moonshine, P Mohammadi, E Banks, T Lappalainen Genome biology 16, 1-12, 2015 | 394 | 2015 |
A quantitative proteome map of the human body L Jiang, M Wang, S Lin, R Jian, X Li, J Chan, G Dong, H Fang, ... Cell 183 (1), 269-283. e19, 2020 | 299 | 2020 |
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk SE Castel, A Cervera, P Mohammadi, F Aguet, F Reverter, A Wolman, ... Nature genetics 50 (9), 1327-1334, 2018 | 206 | 2018 |
Structural basis of the oxidative activation of the carboxysomal γ-carbonic anhydrase, CcmM KL Peña, SE Castel, C De Araujo, GS Espie, MS Kimber Proceedings of the National Academy of Sciences 107 (6), 2455-2460, 2010 | 195 | 2010 |
RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II M Zaratiegui, SE Castel, DV Irvine, A Kloc, J Ren, F Li, E De Castro, ... Nature 479 (7371), 135-138, 2011 | 174 | 2011 |
Co-expression networks reveal the tissue-specific regulation of transcription and splicing A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ... Genome research 27 (11), 1843-1858, 2017 | 170 | 2017 |
Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations S Kim-Hellmuth, M Bechheim, B Pütz, P Mohammadi, Y Nédélec, ... Nature communications 8 (1), 1-10, 2017 | 169 | 2017 |
Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change P Mohammadi, SE Castel, AA Brown, T Lappalainen Genome research 27 (11), 1872-1884, 2017 | 141 | 2017 |
Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease OM de Goede, DC Nachun, NM Ferraro, MJ Gloudemans, AS Rao, ... Cell 184 (10), 2633-2648. e19, 2021 | 132 | 2021 |
Transcriptomic signatures across human tissues identify functional rare genetic variation NM Ferraro, BJ Strober, J Einson, NS Abell, F Aguet, AN Barbeira, ... Science 369 (6509), eaaz5900, 2020 | 126* | 2020 |
Rare variant phasing and haplotypic expression from RNA sequencing with phASER SE Castel, P Mohammadi, WK Chung, Y Shen, T Lappalainen Nature communications 7 (1), 12817, 2016 | 125 | 2016 |
Dicer promotes transcription termination at sites of replication stress to maintain genome stability SE Castel, J Ren, S Bhattacharjee, AY Chang, M Sánchez, A Valbuena, ... Cell 159 (3), 572-583, 2014 | 120 | 2014 |
Genetic regulatory variation in populations informs transcriptome analysis in rare disease P Mohammadi, SE Castel, BB Cummings, J Einson, C Sousa, P Hoffman, ... Science 366 (6463), 351-356, 2019 | 101 | 2019 |
A vast resource of allelic expression data spanning human tissues SE Castel, F Aguet, P Mohammadi, KG Ardlie, T Lappalainen Genome biology 21, 1-12, 2020 | 88 | 2020 |