Dendritic cells direct circadian anti-tumour immune responses C Wang, C Barnoud, M Cenerenti, M Sun, I Caffa, B Kizil, R Bill, Y Liu, ... Nature 614 (7946), 136-143, 2023 | 80 | 2023 |
Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes Y Liu, L Nanni, S Sungalee, M Zufferey, D Tavernari, M Mina, S Ceri, ... Nature communications 12 (1), 2439, 2021 | 70 | 2021 |
Histone acetylation dynamics modulates chromatin conformation and allele-specific interactions at oncogenic loci S Sungalee, Y Liu, RA Lambuta, N Katanayeva, M Donaldson Collier, ... Nature Genetics 53 (5), 650-662, 2021 | 43 | 2021 |
The 3D architecture of the pepper genome and its relationship to function and evolution Y Liao, J Wang, Z Zhu, Y Liu, J Chen, Y Zhou, F Liu, J Lei, BS Gaut, B Cao, ... Nature communications 13 (1), 3479, 2022 | 30 | 2022 |
SigMod: an exact and efficient method to identify a strongly interconnected disease-associated module in a gene network Y Liu, M Brossard, D Roqueiro, P Margaritte-Jeannin, C Sarnowski, ... Bioinformatics 33 (10), 1536-1544, 2017 | 29 | 2017 |
Whole-genome doubling drives oncogenic loss of chromatin segregation RA Lambuta, L Nanni, Y Liu, J Diaz-Miyar, A Iyer, D Tavernari, ... Nature 615 (7954), 925-933, 2023 | 21 | 2023 |
Network-assisted analysis of GWAS data identifies a functionally-relevant gene module for childhood-onset asthma Y Liu, M Brossard, C Sarnowski, A Vaysse, M Moffatt, ... Scientific reports 7 (1), 938, 2017 | 20 | 2017 |
Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology in T-ALL M Antoszewski, N Fournier, GA Ruiz Buendía, J Lourenco, Y Liu, ... Blood, The Journal of the American Society of Hematology 139 (16), 2483-2498, 2022 | 9 | 2022 |
Resistance mechanism to Notch inhibition and combination therapy in human T-cell acute lymphoblastic leukemia L Cao, GA Ruiz Buendía, N Fournier, Y Liu, F Armand, R Hamelin, ... Blood Advances 7 (20), 6240-6252, 2023 | 3 | 2023 |
Multi-omics comparison of malignant and normal uveal melanocytes reveals molecular features of uveal melanoma D Gentien, E Saberi-Ansari, N Servant, A Jolly, P de la Grange, F Némati, ... Cell reports 42 (9), 2023 | 2 | 2023 |
Systematic assessment of gene co-regulation within chromatin domains determines differentially active domains across human cancers M Zufferey, Y Liu, D Tavernari, M Mina, G Ciriello Genome Biology 22 (1), 218, 2021 | 2 | 2021 |