A multiscale coarse-grained model of the SARS-CoV-2 virion A Yu, AJ Pak, P He, V Monje-Galvan, L Casalino, Z Gaieb, AC Dommer, ... Biophysical journal 120 (6), 1097-1104, 2021 | 157 | 2021 |
TRIM5α self-assembly and compartmentalization of the HIV-1 viral capsid A Yu, KA Skorupka, AJ Pak, BK Ganser-Pornillos, O Pornillos, GA Voth Nature communications 11 (1), 1307, 2020 | 65 | 2020 |
Glutamate and glycine binding to the NMDA receptor A Yu, AY Lau Structure 26 (7), 1035-1043. e2, 2018 | 63 | 2018 |
Temperature and phase transferable bottom-up coarse-grained models J Jin, A Yu, GA Voth Journal of chemical theory and computation 16 (11), 6823-6842, 2020 | 45 | 2020 |
Cooperative multivalent receptor binding promotes exposure of the SARS-CoV-2 fusion machinery core AJ Pak, A Yu, Z Ke, JAG Briggs, GA Voth Nature communications 13 (1), 1002, 2022 | 39 | 2022 |
Off-pathway assembly: a broad-spectrum mechanism of action for drugs that undermine controlled HIV-1 viral capsid formation AJ Pak, JMA Grime, A Yu, GA Voth Journal of the American Chemical Society 141 (26), 10214-10224, 2019 | 37 | 2019 |
Atomic-scale characterization of mature HIV-1 capsid stabilization by inositol hexakisphosphate (IP6) A Yu, EMY Lee, J Jin, GA Voth Science Advances 6 (38), eabc6465, 2020 | 33 | 2020 |
Molecular lock regulates binding of glycine to a primitive NMDA receptor A Yu, R Alberstein, A Thomas, A Zimmet, R Grey, ML Mayer, AY Lau Proceedings of the National Academy of Sciences 113 (44), E6786-E6795, 2016 | 31 | 2016 |
Neurotransmitter funneling optimizes glutamate receptor kinetics A Yu, H Salazar, AJR Plested, AY Lau Neuron 97 (1), 139-149. e4, 2018 | 25 | 2018 |
Strain and rupture of HIV-1 capsids during uncoating A Yu, EMY Lee, JAG Briggs, BK Ganser-Pornillos, O Pornillos, GA Voth Proceedings of the National Academy of Sciences 119 (10), e2117781119, 2022 | 20 | 2022 |
Energetics of glutamate binding to an ionotropic glutamate receptor A Yu, AY Lau The Journal of Physical Chemistry B 121 (46), 10436-10442, 2017 | 18 | 2017 |
Integrin-based mechanosensing through conformational deformation TP Driscoll, TC Bidone, SJ Ahn, A Yu, A Groisman, GA Voth, MA Schwartz Biophysical journal 120 (20), 4349-4359, 2021 | 17 | 2021 |
Stability and molecular pathways to the formation of spin defects in silicon carbide EMY Lee, A Yu, JJ de Pablo, G Galli Nature communications 12 (1), 6325, 2021 | 15 | 2021 |
Computing conformational free energies of iGluR ligand-binding domains A Yu, T Wied, J Belcher, AY Lau Ionotropic Glutamate Receptor Technologies, 119-132, 2016 | 7 | 2016 |
Phosphorylation at Ser65 modulates ubiquitin conformational dynamics RA Yovanno, A Yu, TJ Wied, AY Lau Structure 31 (7), 884-890. e2, 2023 | 2 | 2023 |
A multiscale coarse-grained model of HIV-1 capsid self-assembly L Foglia, A Yu Biophysical Journal 123 (3), 348a, 2024 | | 2024 |
Coarse-grained (CG) simulations of HIV maturation within viral particles A Khammari, H Song, E Wang, S Lee, A Yu Biophysical Journal 123 (3), 345a-346a, 2024 | | 2024 |
Atomic-level simulations of self-assembled icosahedral HIV-1 capsid variants L Foglia, A Yu Biophysical Journal 123 (3), 208a, 2024 | | 2024 |
Atomistic simulations of Sec24c binding to the HIV capsid DE Santos, L Foglia, A Yu Biophysical Journal 123 (3), 338a, 2024 | | 2024 |
Multiscale simulations of viruses A Yu, EMY Lee, J Briggs, BK Ganser-Pornillos, O Pornillos, GA Voth Biophysical Journal 121 (3), 330a, 2022 | | 2022 |