MicroRNA-21 contributes to myocardial disease by stimulating MAP kinase signalling in fibroblasts T Thum, C Gross, J Fiedler, T Fischer, S Kissler, M Bussen, P Galuppo, ... Nature 456 (7224), 980-984, 2008 | 2872 | 2008 |
The PTEN-regulating microRNA miR-26a is amplified in high-grade glioma and facilitates gliomagenesis in vivo JT Huse, C Brennan, D Hambardzumyan, B Wee, J Pena, ... Genes & development 23 (11), 1327-1337, 2009 | 663 | 2009 |
miRNA in situ hybridization in formaldehyde and EDC–fixed tissues JTG Pena, C Sohn-Lee, SH Rouhanifard, J Ludwig, M Hafner, ... Nature methods 6 (2), 139-141, 2009 | 348 | 2009 |
ClampFISH detects individual nucleic acid molecules using click chemistry–based amplification SH Rouhanifard, IA Mellis, M Dunagin, S Bayatpour, CL Jiang, I Dardani, ... Nature biotechnology 37 (1), 84-89, 2019 | 144* | 2019 |
Chemical probing of glycans in cells and organisms SH Rouhanifard, LU Nordstrøm, T Zheng, P Wu Chemical Society Reviews 42 (10), 4284-4296, 2013 | 71 | 2013 |
Semi-quantitative detection of pseudouridine modifications and type I/II hypermodifications in human mRNAs using direct long-read sequencing S Tavakoli, M Nabizadeh, A Makhamreh, H Gamper, CA McCormick, ... Nature Communications 14 (1), 334, 2023 | 55* | 2023 |
Tryptophan hydroxylase-2 gene polymorphisms in rhesus monkeys: association with hypothalamic–pituitary–adrenal axis function and in vitro gene expression GL Chen, MA Novak, S Hakim, Z Xie, GM Miller Molecular psychiatry 11 (10), 914-928, 2006 | 55 | 2006 |
Click triazoles for bioconjugation T Zheng, SH Rouhanifard, AS Jalloh, P Wu Click triazoles, 163-183, 2012 | 53 | 2012 |
Visualizing adenosine-to-inosine RNA editing in single mammalian cells IA Mellis, R Gupte, A Raj, SH Rouhanifard Nature Methods 14 (8), 801-804, 2017 | 40 | 2017 |
Functional variation in the 3′ untranslated region of the serotonin transporter in human and rhesus macaque EJ Vallender, CM Priddy, S Hakim, H Yang, GL Chen, GM Miller Genes, Brain and Behavior 7 (6), 690-697, 2008 | 40 | 2008 |
Neutrophils and Ly6Chi monocytes collaborate in generating an optimal cytokine response that protects against pulmonary Legionella pneumophila infection CN Casson, JL Doerner, AM Copenhaver, J Ramirez, AM Holmgren, ... PLoS pathogens 13 (4), e1006309, 2017 | 35 | 2017 |
ClampFISH 2.0 enables rapid, scalable amplified RNA detection in situ I Dardani, BL Emert, Y Goyal, CL Jiang, A Kaur, J Lee, SH Rouhanifard, ... Nature methods 19 (11), 1403-1410, 2022 | 25 | 2022 |
Engineered glycocalyx regulates stem cell proliferation in murine crypt organoids SH Rouhanifard, AL Aguilar, L Meng, KW Moremen, P Wu Cell chemical biology 25 (4), 439-446. e5, 2018 | 15 | 2018 |
CHoMP: A chemoenzymatic histology method using clickable probes SH Rouhanifard, A López‐Aguilar, P Wu ChemBioChem 15 (18), 2667-2673, 2014 | 15 | 2014 |
Messenger-RNA modification standards and machine learning models facilitate absolute site-specific pseudouridine quantification A Makhamreh, S Tavakoli, H Gamper, M Nabizadehmashhadtoroghi, ... bioRxiv, 2022.05. 06.490948, 2022 | 11 | 2022 |
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysis SHR Caroline A. McCormick, Stuart Akeson, Sepideh Tavakoli, Dylan Bloch ... Gigabyte, 2024 | 9* | 2024 |
Detection and isolation of dendritic cells using Lewis X-functionalized magnetic nanoparticles SH Rouhanifard, R Xie, G Zhang, X Sun, X Chen, P Wu Biomacromolecules 13 (10), 3039-3045, 2012 | 8 | 2012 |
Click chemistry-based amplification and detection of endogenous RNA and DNA molecules in situ using clampFISH probes S Tavakoli, Y Liu, JL Potts, SH Rouhanifard Methods in Enzymology 641, 459-476, 2020 | 7 | 2020 |
Enzymatic synthesis of RNA standards for mapping and quantifying RNA modifications in sequencing analysis H Gamper, C McCormick, A Makhamreh, M Wanunu, SH Rouhanifard, ... Methods in Enzymology 692, 127-153, 2023 | 4* | 2023 |
Monitoring equilibrium changes in RNA structure by'peroxidative'and'oxidative'hydroxyl radical footprinting R Bachu, FCS Padlan, S Rouhanifard, M Brenowitz, JC Schlatterer JoVE (Journal of Visualized Experiments), e3244, 2011 | 3 | 2011 |