Global morphological analysis of marine viruses shows minimal regional variation and dominance of non-tailed viruses JR Brum, RO Schenck, MB Sullivan The ISME journal 7 (9), 1738-1751, 2013 | 186 | 2013 |
NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline RO Schenck, E Lakatos, C Gatenbee, TA Graham, ARA Anderson BMC bioinformatics 20, 1-6, 2019 | 101 | 2019 |
Evolutionary dynamics of neoantigens in growing tumors E Lakatos, MJ Williams, RO Schenck, WCH Cross, J Househam, L Zapata, ... Nature genetics 52 (10), 1057-1066, 2020 | 95 | 2020 |
Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization RR Bravo, E Baratchart, J West, RO Schenck, AK Miller, J Gallaher, ... PLoS computational biology 16 (3), e1007635, 2020 | 83 | 2020 |
Novel circular single-stranded DNA viruses identified in marine invertebrates reveal high sequence diversity and consistent predicted intrinsic disorder patterns within … K Rosario, RO Schenck, RC Harbeitner, SN Lawler, M Breitbart Frontiers in microbiology 6, 696, 2015 | 80 | 2015 |
Normal tissue architecture determines the evolutionary course of cancer J West, RO Schenck, C Gatenbee, M Robertson-Tessi, ARA Anderson Nature communications 12 (1), 2060, 2021 | 72 | 2021 |
Dynamic and adaptive cancer stem cell population admixture in colorectal neoplasia EG Vazquez, N Nasreddin, GN Valbuena, EJ Mulholland, ... Cell Stem Cell 29 (8), 1213-1228. e8, 2022 | 57 | 2022 |
Reduction of nutrients, microbes and personal care products in domestic wastewater by a benchtop electrocoagulation unit EM Symonds, MM Cook, SM McQuaig, RM Ulrich, RO Schenck, ... Scientific reports 5 (1), 9380, 2015 | 44 | 2015 |
Immunosuppressive niche engineering at the onset of human colorectal cancer CD Gatenbee, AM Baker, RO Schenck, M Strobl, J West, MP Neves, ... Nature Communications 13 (1), 1798, 2022 | 33* | 2022 |
Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues C Gabbutt, RO Schenck, DJ Weisenberger, C Kimberley, A Berner, ... Nature biotechnology 40 (5), 720-730, 2022 | 29 | 2022 |
EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data CD Gatenbee, RO Schenck, RR Bravo, ARA Anderson BMC bioinformatics 20, 1-4, 2019 | 21 | 2019 |
Highly disordered proteins in prostate cancer V N Uversky, I Na, K S Landau, R O Schenck Current Protein and Peptide Science 18 (5), 453-481, 2017 | 14 | 2017 |
Unfoldomics of prostate cancer: on the abundance and roles of intrinsically disordered proteins in prostate cancer KS Landau, I Na, RO Schenck, VN Uversky Asian Journal of Andrology 18 (5), 662-672, 2016 | 8 | 2016 |
How homeostasis limits keratinocyte evolution RO Schenck, E Kim, RR Bravo, J West, S Leedham, D Shibata, ... bioRxiv, 548131, 2019 | 7 | 2019 |
Gattaca: Base-pair resolution mutation tracking for somatic evolution studies using agent-based models RO Schenck, G Brosula, J West, S Leedham, D Shibata, ARA Anderson Molecular Biology and Evolution 39 (4), msac058, 2022 | 5 | 2022 |
The polyclonal path to malignant transformation in familial adenomatous polyposis RO Schenck, A Khan, A Horning, ED Esplin, E Monte, S Wu, C Hanson, ... Cancer Research 83 (7_Supplement), 3497-3497, 2023 | 1 | 2023 |
Multi-ancestral origins of colorectal lesionsMulti-ancestral origins of colorectal lesions RO Schenck, A Khan, A Horning, ED Esplin, D Van Egeren, ... Cancer Research 84 (6_Supplement), 3872-3872, 2024 | | 2024 |
Abstract A011: Modeling the coevolution of native and CAR T-cells in large B cell lymphoma reveals a potential biomarker for response to therapy CD Gatenbee, M Robertson-Tessi, M Strobl, RO Schenck, B Ziccheddu, ... Cancer Research 84 (3_Supplement_2), A011-A011, 2024 | | 2024 |
Abstract B008: The polyclonal path towards malignant transformation in familial adenomatous polyposis RO Schenck, A Khan, AM Horning, ED Esplin, HTAN Consortia, ... Cancer Research 84 (3_Supplement_2), B008-B008, 2024 | | 2024 |
Mutation agnostic diagnosis of clonal hematopoiesis of indeterminate potential using fluctuating methylation clocks RO Schenck, NA Jakobsen, V Turati, D Shibata, P Vyas, S Leedham, ... Cancer Research 82 (12_Supplement), 634-634, 2022 | | 2022 |