| Alcov: estimating variant of concern abundance from SARS-CoV-2 wastewater sequencing data I Ellmen, MDJ Lynch, D Nash, J Cheng, JI Nissimov, TC Charles medRxiv, 2021.06. 03.21258306, 2021 | 13 | 2021 |
| A novel tiled amplicon sequencing assay targeting the tomato brown rugose fruit virus (ToBRFV) genome reveals widespread distribution in municipal wastewater treatment systems … D Nash, I Ellmen, JJ Knapp, R Menon, AK Overton, J Cheng, MDJ Lynch, ... Viruses 16 (3), 460, 2024 | 7 | 2024 |
| Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data SG Sutcliffe, SA Kraemer, I Ellmen, JJ Knapp, AK Overton, D Nash, ... Microbial Genomics 10 (5), 001249, 2024 | 1 | 2024 |
| Learning novel SARS-CoV-2 lineages from wastewater sequencing data I Ellmen, AK Overton, JJ Knapp, D Nash, H Ho, Y Hungwe, S Prasla, ... | | 2024 |
| Discovering new viral lineages and estimating their abundance in wastewater I Ellmen University of Waterloo, 2022 | | 2022 |
