Highly parallel SNP genotyping JB Fan, A Oliphant, R Shen, BG Kermani, F Garcia, KL Gunderson, ... Cold Spring Harbor symposia on quantitative biology 68, 69-78, 2003 | 799 | 2003 |
A versatile assay for high-throughput gene expression profiling on universal array matrices JB Fan, JM Yeakley, M Bibikova, E Chudin, E Wickham, J Chen, D Doucet, ... Genome research 14 (5), 878-885, 2004 | 247 | 2004 |
Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion S Zhao, Y Zhang, R Gamini, B Zhang, D Von Schack Scientific reports 8 (1), 4781, 2018 | 236 | 2018 |
Evaluation and comparison of computational tools for RNA-seq isoform quantification C Zhang, B Zhang, LL Lin, S Zhao BMC genomics 18, 1-11, 2017 | 194 | 2017 |
Differential methylation of the TRPA1 promoter in pain sensitivity JT Bell, AK Loomis, LM Butcher, F Gao, B Zhang, CL Hyde, J Sun, H Wu, ... Nature communications 5 (1), 2978, 2014 | 163 | 2014 |
A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the context of RNA-seq read mapping and gene quantification S Zhao, B Zhang BMC genomics 16, 1-14, 2015 | 156 | 2015 |
Fold prediction by a hierarchy of sequence, threading, and modeling methods ŁU Jaroszwski, L Rychlewski, B Zhang, A Godzik Protein Science 7 (6), 1431-1440, 1998 | 137 | 1998 |
Fold and function predictions for Mycoplasma genitalium proteins L Rychlewski, B Zhang, A Godzik Folding and Design 3 (4), 229-238, 1998 | 131 | 1998 |
High-resolution functional proteomics by active-site peptide profiling ES Okerberg, J Wu, B Zhang, B Samii, K Blackford, DT Winn, KR Shreder, ... Proceedings of the National Academy of Sciences 102 (14), 4996-5001, 2005 | 127 | 2005 |
Comparison of stranded and non-stranded RNA-seq transcriptome profiling and investigation of gene overlap S Zhao, Y Zhang, W Gordon, J Quan, H Xi, S Du, D von Schack, B Zhang BMC genomics 16, 1-14, 2015 | 118 | 2015 |
Recombinase‐mediated cassette exchange (RMCE) for monoclonal antibody expression in the commercially relevant CHOK1SV cell line L Zhang, MC Inniss, S Han, M Moffat, H Jones, B Zhang, WL Cox, ... Biotechnology Progress 31 (6), 1645-1656, 2015 | 101 | 2015 |
Cx3cr1-deficient microglia exhibit a premature aging transcriptome S Gyoneva, R Hosur, D Gosselin, B Zhang, Z Ouyang, AC Cotleur, ... Life science alliance 2 (6), 2019 | 78 | 2019 |
From fold predictions to function predictions: automation of functional site conservation analysis for functional genome predictions B Zhang, L Rychlewski, K Pawlowski, JS Fetrow, J Skolnick, A Godzik Protein Science 8 (5), 1104-1115, 1999 | 78 | 1999 |
Genes contributing to pain sensitivity in the normal population: an exome sequencing study FMK Williams, S Scollen, D Cao, Y Memari, CL Hyde, B Zhang, B Sidders, ... PLoS genetics 8 (12), e1003095, 2012 | 73 | 2012 |
Functional insights from structural predictions: analysis of the Escherichia coli genome L Rychlewski, B Zhang, A Godzik Protein Science 8 (3), 614-624, 1999 | 68 | 1999 |
QuickMIRSeq: a pipeline for quick and accurate quantification of both known miRNAs and isomiRs by jointly processing multiple samples from microRNA sequencing S Zhao, W Gordon, S Du, C Zhang, W He, L Xi, S Mathur, M Agostino, ... BMC bioinformatics 18, 1-14, 2017 | 54 | 2017 |
B cell-intrinsic role for IRF5 in TLR9/BCR-induced human B cell activation, proliferation, and plasmablast differentiation S De, B Zhang, T Shih, S Singh, A Winkler, R Donnelly, BJ Barnes Frontiers in immunology 8, 1938, 2018 | 49 | 2018 |
QuickRNASeq lifts large-scale RNA-seq data analyses to the next level of automation and interactive visualization S Zhao, L Xi, J Quan, H Xi, Y Zhang, D von Schack, M Vincent, B Zhang BMC genomics 17, 1-15, 2016 | 47 | 2016 |
Proteogenomic markers of chemotherapy resistance and response in triple-negative breast cancer M Anurag, EJ Jaehnig, K Krug, JT Lei, EJ Bergstrom, BJ Kim, TD Vashist, ... Cancer discovery 12 (11), 2586-2605, 2022 | 42 | 2022 |
Thrombospondin-I is a critical modulator in non-alcoholic steatohepatitis (NASH) J Min-DeBartolo, F Schlerman, S Akare, J Wang, J McMahon, Y Zhan, ... PLoS One 14 (12), e0226854, 2019 | 42 | 2019 |