| Leaf: an open-source, model-agnostic, data-driven web application for cohort discovery and translational biomedical research NJ Dobbins, CH Spital, RA Black, JM Morrison, B De Veer, E Zampino, ... Journal of the American Medical Informatics Association 27 (1), 109-118, 2020 | 45 | 2020 |
| Leveraging natural language processing to augment structured social determinants of health data in the electronic health record K Lybarger, NJ Dobbins, R Long, A Singh, P Wedgeworth, Ö Uzuner, ... Journal of the American Medical Informatics Association 30 (8), 1389-1397, 2023 | 15 | 2023 |
| The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria NJ Dobbins, T Mullen, Ö Uzuner, M Yetisgen Scientific Data 9 (1), 490, 2022 | 14 | 2022 |
| A continuously benchmarked and crowdsourced challenge for rapid development and evaluation of models to predict COVID-19 diagnosis and hospitalization Y Yan, T Schaffter, T Bergquist, T Yu, J Prosser, Z Aydin, A Jabeer, ... JAMA Network Open 4 (10), e2124946-e2124946, 2021 | 12 | 2021 |
| Extracting patient-level social determinants of health into the OMOP common data model J Phuong, E Zampino, N Dobbins, J Espinoza, D Meeker, H Spratt, ... AMIA Annual Symposium Proceedings 2021, 989, 2021 | 12 | 2021 |
| Prompt-based extraction of social determinants of health using few-shot learning GK Ramachandran, Y Fu, B Han, K Lybarger, NJ Dobbins, Ö Uzuner, ... arXiv preprint arXiv:2306.07170, 2023 | 11 | 2023 |
| Transferability of neural network clinical deidentification systems K Lee, NJ Dobbins, B McInnes, M Yetisgen, Ö Uzuner Journal of the American Medical Informatics Association 28 (12), 2661-2669, 2021 | 4 | 2021 |
| Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods Y Fu, GK Ramachandran, NJ Dobbins, N Park, M Leu, AR Rosenberg, ... arXiv preprint arXiv:2404.00826, 2024 | 3 | 2024 |
| LeafAI: query generator for clinical cohort discovery rivaling a human programmer NJ Dobbins, B Han, W Zhou, KF Lan, HN Kim, R Harrington, Ö Uzuner, ... Journal of the American Medical Informatics Association 30 (12), 1954-1964, 2023 | 3 | 2023 |
| Generalizable and Scalable Multistage Biomedical Concept Normalization Leveraging Large Language Models NJ Dobbins arXiv preprint arXiv:2405.15122, 2024 | 2 | 2024 |
| Variable Clinical Presentation of Shwachman-Diamond Syndrome: Update From the North-American Shwachman-Diamond Syndrome Registry. KC Myers, AA Bolyard, B Otto, N Dobbins, A Jones, TE Wong, RE Harris, ... Blood 120 (21), 2367, 2012 | 2 | 2012 |
| Extracting COVID-19 Related Symptoms from EHR Data: A Comparison of Three Methods HA Burkhardt, N Dobbins, B Mollis, M Au, KP Kwan, MY Ma, A Singh, ... | 1 | |
| Towards cross-application model-agnostic federated cohort discovery NJ Dobbins, M Morris, E Sadhu, D MacFadden, MD Nazaire, W Simons, ... Journal of the American Medical Informatics Association 31 (10), 2202-2209, 2024 | | 2024 |
| Deep Learning Models Can Predict Violence and Threats Against Healthcare Providers Using Clinical Notes NJ Dobbins, J Chipkin, T Byrne, O Ghabra, J Siar, M Sauder, RM Huijon, ... medRxiv, 2024.05. 27.24308001, 2024 | | 2024 |
| Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning G Kaushik Ramachandran, Y Fu, B Han, K Lybarger, NJ Dobbins, ... arXiv e-prints, arXiv: 2306.07170, 2023 | | 2023 |
| Explainable query generation for cohort discovery and biomedical reasoning using natural language NJ Dobbins University of Washington, 2023 | | 2023 |
| The NLP Sandbox: an efficient model-to-data system to enable federated and unbiased evaluation of clinical NLP models Y Yan, T Yu, K Muenzen, S Liu, C Boyle, G Koslowski, J Zheng, ... arXiv preprint arXiv:2206.14181, 2022 | | 2022 |
| Performance of Automatic De-identification Across Different Note Types N Dobbins, D Wayne, K Lee, Ö Uzuner, M Yetisgen arXiv preprint arXiv:2102.11032, 2021 | | 2021 |
| Application of Spectral Density/Periodogram Analysis to Serial Neutrophil Counts to Diagnose Cyclic Neutropenia NJ Dobbins, AA Bolyard, RT Chang, J Self, GP Langlois, MC Mackey, ... Blood 126 (23), 4608, 2015 | | 2015 |
| SHWACHMAN-DIAMOND SYNDROME IN ADULTS K Myers, AA Bolyard, A Jones, B Otto, N Dobbins, J Moore, R Harris, ... PEDIATRIC BLOOD & CANCER 61, S9-S9, 2014 | | 2014 |
