| Interpreting the dynamics of binding interactions of snRNA and U1A using a coarse-grained model Z Han, Q Shao, W Gong, S Wang, J Su, C Li, Y Zhang Biophysical Journal 116 (9), 1625-1636, 2019 | 13 | 2019 |
| Core genome mediated potential vaccine targets prioritization against Clostridium difficile via reverse vaccinology-an immuno-informatics approach S Aiman, F Ali, A Zia, M Aslam, Z Han, S Shams, A Khan, C Li Journal of Biological Research-Thessaloniki 29, 2022 | 10 | 2022 |
| Edaphic variables are better indicators of soil microbial functional structure than plant-related ones in subtropical broad-leaved forests J Cheng, Z Han, J Cong, J Yu, J Zhou, M Zhao, Y Zhang Science of the Total Environment 773, 145630, 2021 | 9 | 2021 |
| Insight into Shared Properties and Differential Dynamics and Specificity of Secretory Phospholipase A2 Family Members S Zhang, W Gong, Z Han, Y Liu, C Li The Journal of Physical Chemistry B 125 (13), 3353-3363, 2021 | 9 | 2021 |
| Equally weighted multiscale elastic network model and its comparison with traditional and parameter-free models W Gong, Y Liu, Y Zhao, S Wang, Z Han, C Li Journal of Chemical Information and Modeling 61 (2), 921-937, 2021 | 9 | 2021 |
| Specific recognition between YTHDF3 and m6A‐modified RNA: An all‐atom molecular dynamics simulation study W Zhou, Z Han, Z Wu, W Gong, S Yang, L Chen, C Li Proteins: Structure, Function, and Bioinformatics 90 (11), 1965-1972, 2022 | 5 | 2022 |
| Key Residues in δ Opioid Receptor Allostery Explored by the Elastic Network Model and the Complex Network Model Combined with the Perturbation Method L Chen, W Gong, Z Han, W Zhou, S Yang, C Li Journal of Chemical Information and Modeling 62 (24), 6727-6738, 2022 | 5 | 2022 |
| Allosteric mechanism of human mitochondrial phenylalanyl-tRNA synthetase: an atomistic MD simulation and a mutual Information-Based network study Q Shao, Z Han, J Cheng, Q Wang, W Gong, C Li The Journal of Physical Chemistry B 125 (28), 7651-7661, 2021 | 5 | 2021 |
| Study on functional sites in human multidrug resistance protein 1 (hMRP1) J He, Z Han, QUA Farooq, C Li Proteins: Structure, Function, and Bioinformatics 89 (6), 659-670, 2021 | 5 | 2021 |
| Dynamic insights into the self-activation pathway and allosteric regulation of the orphan G-protein-coupled receptor GPR52 Z Wu, Z Han, L Tao, X Sun, J Su, J Hu, C Li Journal of Chemical Information and Modeling 63 (18), 5847-5862, 2023 | 3 | 2023 |
| Allosteric mechanism for SL RNA recognition by polypyrimidine tract binding protein RRM1: An atomistic MD simulation and network-based study Z Han, Z Wu, W Gong, W Zhou, L Chen, C Li International Journal of Biological Macromolecules 221, 763-772, 2022 | 3 | 2022 |
| Dynamics of binding interactions of TDP‐43 and RNA: An equally weighted multiscale elastic network model study X Deng, S Wang, Z Han, W Gong, Y Liu, C Li Proteins: Structure, Function, and Bioinformatics 90 (2), 589-600, 2022 | 3 | 2022 |
| Insight into the nucleoside transport and inhibition of human ENT1 Z Wu, Z Han, W Zhou, X Sun, L Chen, S Yang, J Hu, C Li Current Research in Structural Biology 4, 192-205, 2022 | 2 | 2022 |
| An investigation into the allosteric mechanism of GPCR A2A adenosine receptor with trajectory-based information theory and complex network model Q Wang, S Zhang, Z Han, H Fan, C Li Journal of Biomolecular Structure and Dynamics 39 (17), 6431-6439, 2021 | 2 | 2021 |
| Study of the Allosteric Mechanism of Human Mitochondrial Phenylalanyl-tRNA Synthetase by Transfer Entropy via an Improved Gaussian Network Model and Co-evolution Analyses Z Han, X Wang, Z Wu, C Li The Journal of Physical Chemistry Letters 14 (14), 3452-3460, 2023 | 1 | 2023 |
| Prediction of Protein Allosteric Sites with Transfer Entropy and Spatial Neighbor-Based Evolutionary Information Learned by an Ensemble Model F Hu, F Chang, L Tao, X Sun, L Liu, Y Zhao, Z Han, C Li Journal of Chemical Information and Modeling, 2024 | | 2024 |
| Insights into Activation Dynamics and Functional Sites of Inwardly Rectifying Potassium Channel Kir3. 2 by an Elastic Network Model Combined with Perturbation Methods Y Zhao, X Zhang, L Liu, F Hu, F Chang, Z Han, C Li The Journal of Physical Chemistry B 128 (6), 1360-1370, 2024 | | 2024 |
| Core-genome-mediated promising alternative drug and multi-epitope vaccine targets prioritization against infectious Clostridium difficile S Aiman, QA Farooq, Z Han, M Aslam, J Zhang, A Khan, A Ahmad, C Li, ... Plos one 19 (1), e0293731, 2024 | | 2024 |
| Molecular insight into human P-glycoprotein allosteric transition from outward-to inward-facing state Y Zhang, Z Han, C Li Chemical Physics 538, 110823, 2020 | | 2020 |
| Study on Allosteric Mechanism of Human Mitochondrial Phenylalanyl-tRNA Synthetase by Transfer Entropy from Improved Gaussian Network Model and Co-evolution Analyses Z Han, X Wang, Z Wu, C Li | | |
