The cohesin release factor WAPL restricts chromatin loop extension JHI Haarhuis, RH van der Weide, VA Blomen, JO Yáñez-Cuna, ... Cell 169 (4), 693-707. e14, 2017 | 683 | 2017 |
High-throughput identification of human SNPs affecting regulatory element activity J van Arensbergen, L Pagie, VD FitzPatrick, M de Haas, MP Baltissen, ... Nature genetics 51 (7), 1160-1169, 2019 | 190 | 2019 |
Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance R Schep, EK Brinkman, C Leemans, X Vergara, RH van der Weide, ... Molecular cell 81 (10), 2216-2230. e10, 2021 | 153 | 2021 |
Systemic loss and gain of chromatin architecture throughout zebrafish development LJT Kaaij, RH van der Weide, RF Ketting, E de Wit Cell reports 24 (1), 1-10. e4, 2018 | 137 | 2018 |
The ChAHP complex counteracts chromatin looping at CTCF sites that emerged from SINE expansions in mouse LJT Kaaij, F Mohn, RH van der Weide, E de Wit, M Bühler Cell 178 (6), 1437-1451. e14, 2019 | 123 | 2019 |
Genomic landscape of rat strain and substrain variation R Hermsen, J de Ligt, W Spee, F Blokzijl, S Schäfer, E Adami, S Boymans, ... BMC genomics 16, 1-14, 2015 | 97 | 2015 |
Hi-C analyses with GENOVA: a case study with cohesin variants RH van der Weide, T van den Brand, JHI Haarhuis, H Teunissen, ... NAR genomics and bioinformatics 3 (2), lqab040, 2021 | 74 | 2021 |
Distinct roles for condensin’s two ATPase sites in chromosome condensation AMO Elbatsh, E Kim, JM Eeftens, JA Raaijmakers, RH van der Weide, ... Molecular Cell 76 (5), 724-737. e5, 2019 | 43 | 2019 |
Rapid depletion of CTCF and cohesin proteins reveals dynamic features of chromosome architecture NQ Liu, M Magnitov, M Schijns, T van Schaik, RH van der Weide, ... bioRxiv, 2021.08. 27.457977, 2021 | 26 | 2021 |
A Mediator-cohesin axis controls heterochromatin domain formation JHI Haarhuis, RH van der Weide, VA Blomen, KD Flach, H Teunissen, ... Nature Communications 13 (1), 754, 2022 | 19 | 2022 |
Distinct roles for CKM–Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction E Dimitrova, A Feldmann, RH van der Weide, KD Flach, A Lastuvkova, ... Nature structural & molecular biology 29 (10), 1000-1010, 2022 | 14 | 2022 |
Developing landscapes: genome architecture during early embryogenesis RH van der Weide, E de Wit Current Opinion in Genetics & Development 55, 39-45, 2019 | 11 | 2019 |
A natural WNT signaling variant potently synergizes with Cdkn2ab loss in skin carcinogenesis P Krimpenfort, M Snoek, JP Lambooij, JY Song, R van der Weide, ... Nature Communications 10 (1), 1425, 2019 | 11 | 2019 |
The genomic scrapheap challenge; extracting relevant data from unmapped whole genome sequencing reads, including strain specific genomic segments, in rats RH Van Der Weide, M Simonis, R Hermsen, P Toonen, E Cuppen, ... PloS one 11 (8), e0160036, 2016 | 8 | 2016 |
Condensin’s ATPase machinery drives and dampens mitotic chromosome condensation AMO Elbatsh, JA Raaijmakers, RH van der Weide, J Kuit de Bos, ... BioRxiv, 216630, 2017 | 4 | 2017 |
Combinatorial single-cell profiling of major chromatin types with MAbID SJA Lochs, RH van der Weide, KL de Luca, T Korthout, RE van Beek, ... Nature Methods 21 (1), 72-82, 2024 | 3 | 2024 |
Combinatorial single-cell profiling of all major chromatin types with MAbID SJA Lochs, RH van der Weide, KL de Luca, T Korthout, RE van Beek, ... bioRxiv, 2023.01. 18.524584, 2023 | | 2023 |
SuRE-SNP table L Pagie, B van Steensel, J van Arensbergen, H Bussemaker, V FitzPatrick, ... OSF, 2019 | | 2019 |
Systematic identification of human SNPs affecting regulatory element activity: supplementary data J van Arensbergen, L Pagie, V FitzPatrick, M de Haas, M Baltissen, ... OSF, 2019 | | 2019 |