ssDNA accessibility of Rad51 is regulated by orchestrating multiple RPA dynamics J Ding, X Li, J Shen, Y Zhao, S Zhong, L Lai, H Niu, Z Qi Nature Communications 14 (1), 3864, 2023 | 8 | 2023 |
Stochastic dynamics and ribosome-RNAP interactions in transcription-translation coupling X Li, T Chou Biophysical Journal 122 (1), 254-266, 2023 | 3 | 2023 |
An age-structured Lotka-Volterra model and the emergence of overcompensation M Xia, X Li, T Chou APS March Meeting Abstracts 2023, G08. 009, 2023 | 3 | 2023 |
Squared Wasserstein-2 distance for efficient reconstruction of stochastic differential equations M Xia, X Li, Q Shen, T Chou arXiv preprint arXiv:2401.11354, 2024 | 2 | 2024 |
A Spectral Approach for Learning Spatiotemporal Neural Differential Equations M Xia, X Li, Q Shen, T Chou arXiv preprint arXiv:2309.16131, 2023 | 2 | 2023 |
Reliable ligand discrimination in stochastic multistep kinetic proofreading: First passage time vs. product counting strategies X Li, T Chou PLOS Computational Biology 20 (6), e1012183, 2024 | 1 | 2024 |
An efficient Wasserstein-distance approach for reconstructing jump-diffusion processes using parameterized neural networks M Xia, X Li, Q Shen, T Chou arXiv preprint arXiv:2406.01653, 2024 | 1 | 2024 |
Stochastic nucleosome disassembly mediated by remodelers and histone fragmentation X Li, T Chou The Journal of Chemical Physics 159 (20), 2023 | 1 | 2023 |
Population overcompensation, transients, and oscillations in age-structured Lotka-Volterra models M Xia, X Li, T Chou arXiv preprint arXiv:2303.00864, 2023 | 1 | 2023 |
Learning unbounded-domain spatiotemporal differential equations using adaptive spectral methods M Xia, X Li, Q Shen, T Chou Journal of Applied Mathematics and Computing, 1-27, 2024 | | 2024 |
The role of APOBEC3-induced mutations in the differential evolution of monkeypox virus X Li, S Habibipour, T Chou, OO Yang Virus Evolution 9 (2), vead058, 2023 | | 2023 |