Effects of mutations and post-translational modifications on α-synuclein in vitro aggregation SX Pancoe, YJ Wang, M Shimogawa, RM Perez, S Giannakoulias, ... Journal of molecular biology 434 (23), 167859, 2022 | 22 | 2022 |
AggBERT: Best in Class Prediction of Hexapeptide Amyloidogenesis with a Semi-Supervised ProtBERT Model R Perez, X Li, S Giannakoulias, EJ Petersson Journal of Chemical Information and Modeling 63 (18), 5727-5733, 2023 | 4 | 2023 |
Semi-synthetic CoA-α-Synuclein Constructs Trap N-terminal Acetyltransferase NatB for Binding Mechanism Studies B Pan, SM Gardner, K Schultz, RM Perez, S Deng, M Shimogawa, K Sato, ... Journal of the American Chemical Society 145 (25), 14019-14030, 2023 | 1 | 2023 |
FRETing about the details: Case studies in the use of a genetically encoded fluorescent amino acid for distance‐dependent energy transfer MB Cory, CM Jones, KD Shaffer, Y Venkatesh, S Giannakoulias, ... Protein Science 32 (5), e4633, 2023 | 1 | 2023 |
The LexA–RecA* structure reveals a cryptic lock-and-key mechanism for SOS activation MB Cory, A Li, CM Hurley, PJ Carman, RA Pumroy, ZM Hostetler, ... Nature Structural & Molecular Biology, 1-10, 2024 | | 2024 |
Proteins Need Extra Attention: Improving the Predictive Power of Protein Language Models on Mutational Datasets with Hint Tokens X Li, RM Perez, S Giannakoulias, EJ Petersson bioRxiv, 2023.12. 05.570055, 2023 | | 2023 |