Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile CG Buffie, V Bucci, RR Stein, PT McKenney, L Ling, A Gobourne, D No, ... Nature 517 (7533), 205-208, 2015 | 1866 | 2015 |
A defined commensal consortium elicits CD8 T cells and anti-cancer immunity T Tanoue, S Morita, DR Plichta, AN Skelly, W Suda, Y Sugiura, ... Nature 565 (7741), 600-605, 2019 | 909 | 2019 |
Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota RR Stein, V Bucci, NC Toussaint, CG Buffie, G Rätsch, EG Pamer, ... PLoS computational biology 9 (12), e1003388, 2013 | 643 | 2013 |
Intestinal microbiota containing Barnesiella cures vancomycin-resistant Enterococcus faecium colonization. C Ubeda, V Bucci, S Caballero, A Djukovic, NC Toussaint, M Equinda, ... Infection and Immunity, 2013 | 512 | 2013 |
Alzheimer’s disease microbiome is associated with dysregulation of the anti-inflammatory P-glycoprotein pathway JP Haran, SK Bhattarai, SE Foley, P Dutta, DV Ward, V Bucci, ... MBio 10 (3), 10.1128/mbio. 00632-19, 2019 | 273 | 2019 |
MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses V Bucci, B Tzen, N Li, M Simmons, T Tanoue, E Bogart, L Deng, ... Genome biology 17, 1-17, 2016 | 258 | 2016 |
A bunch of tiny individuals—Individual-based modeling for microbes FL Hellweger, V Bucci Ecological Modelling 220 (1), 8-22, 2009 | 185 | 2009 |
Antibiotic treatment for Tuberculosis induces a profound dysbiosis of the microbiome that persists long after therapy is completed MF Wipperman, DW Fitzgerald, MAJ Juste, Y Taur, S Namasivayam, ... Scientific reports 7 (1), 10767, 2017 | 181 | 2017 |
Emergence of spatial structure in the tumor microenvironment due to the Warburg effect C Carmona-Fontaine, V Bucci, L Akkari, M Deforet, JA Joyce, JB Xavier Proceedings of the National Academy of Sciences 110 (48), 19402-19407, 2013 | 152 | 2013 |
Towards predictive models of the human gut microbiome V Bucci, JB Xavier Journal of molecular biology 426 (23), 3907-3916, 2014 | 145 | 2014 |
Cutting through the complexity of cell collectives CD Nadell, V Bucci, K Drescher, SA Levin, BL Bassler, JB Xavier Proceedings of the Royal Society B: biological sciences 280 (1755), 20122770, 2013 | 135 | 2013 |
Phage mobility is a core determinant of phage–bacteria coexistence in biofilms EL Simmons, K Drescher, CD Nadell, V Bucci The ISME journal 12 (2), 532-543, 2018 | 131 | 2018 |
Inflammation-type dysbiosis of the oral microbiome associates with the duration of COVID-19 symptoms and long COVID JP Haran, E Bradley, AL Zeamer, L Cincotta, MC Salive, P Dutta, ... Jci Insight 6 (20), 2021 | 118 | 2021 |
Extrathymically generated regulatory T cells establish a niche for intestinal border-dwelling bacteria and affect physiologic metabolite balance C Campbell, S Dikiy, SK Bhattarai, T Chinen, F Matheis, M Calafiore, ... Immunity 48 (6), 1245-1257. e9, 2018 | 118 | 2018 |
The evolution of bacteriocin production in bacterial biofilms V Bucci, CD Nadell, JB Xavier The American Naturalist 178 (6), E162-E173, 2011 | 96 | 2011 |
Engineered Probiotic for the Inhibition of Salmonella via Tetrathionate-Induced Production of Microcin H47 JD Palmer, E Piattelli, BA McCormick, MW Silby, CJ Brigham, V Bucci ACS infectious diseases 4 (1), 39-45, 2018 | 92 | 2018 |
The nursing home elder microbiome stability and associations with age, frailty, nutrition and physical location JP Haran, V Bucci, P Dutta, D Ward, B McCormick Journal of medical microbiology 67 (1), 40-51, 2018 | 88 | 2018 |
Colonization of the live biotherapeutic product VE303 and modulation of the microbiota and metabolites in healthy volunteers M Dsouza, R Menon, E Crossette, SK Bhattarai, J Schneider, YG Kim, ... Cell Host & Microbe 30 (4), 583-598. e8, 2022 | 74 | 2022 |
Computer-guided design of optimal microbial consortia for immune system modulation RR Stein, T Tanoue, RL Szabady, SK Bhattarai, B Olle, JM Norman, ... Elife 7, e30916, 2018 | 74 | 2018 |
Mucosal-associated invariant and γδ T cell subsets respond to initial Mycobacterium tuberculosis infection CK Vorkas, MF Wipperman, K Li, J Bean, SK Bhattarai, M Adamow, ... JCI insight 3 (19), 2018 | 71 | 2018 |