Different force fields give rise to different amyloid aggregation pathways in molecular dynamics simulations S Samantray, F Yin, B Kav, B Strodel Journal of chemical information and modeling 60 (12), 6462-6475, 2020 | 82 | 2020 |
Disorder-to-order transition of the amyloid-β peptide upon lipid binding H Fatafta, B Kav, BF Bundschuh, J Loschwitz, B Strodel Biophysical chemistry 280, 106700, 2022 | 65 | 2022 |
Headgroup structure and cation binding in phosphatidylserine lipid bilayers H Antila, P Buslaev, F Favela-Rosales, TM Ferreira, I Gushchin, ... The Journal of Physical Chemistry B 123 (43), 9066-9079, 2019 | 57 | 2019 |
Force generation by the growth of amyloid aggregates TW Herling, GA Garcia, TCT Michaels, W Grentz, J Dean, U Shimanovich, ... Proceedings of the National Academy of Sciences 112 (31), 9524-9529, 2015 | 31 | 2015 |
Emerging era of biomolecular membrane simulations: automated physically-justified force field development and quality-evaluated databanks HS Antila, B Kav, MS Miettinen, H Martinez-Seara, P Jungwirth, ... The Journal of Physical Chemistry B 126 (23), 4169-4183, 2022 | 19 | 2022 |
Weak carbohydrate–carbohydrate interactions in membrane adhesion are fuzzy and generic B Kav, A Grafmüller, E Schneck, TR Weikl Nanoscale 12 (33), 17342-17353, 2020 | 10 | 2020 |
Overlay databank unlocks data-driven analyses of biomolecules for all AM Kiirikki, HS Antila, LS Bort, P Buslaev, F Favela-Rosales, TM Ferreira, ... Nature Communications 15 (1), 1136, 2024 | 9 | 2024 |
NMRlipids Databank makes data-driven analysis of biomembrane properties accessible for all A Kiirikki, H Antila, L Bort, P Buslaev, F Fernando, TM Ferreira, P Fuchs, ... | 7 | 2023 |
Binding and segregation of proteins in membrane adhesion: theory, modeling, and simulations TR Weikl, J Hu, B Kav, B Różycki Advances in Biomembranes and Lipid Self-Assembly 30, 159-194, 2019 | 7 | 2019 |
Probing the link between pancratistatin and mitochondrial apoptosis through changes in the membrane dynamics on the nanoscale SR Castillo, BW Rickeard, M DiPasquale, MHL Nguyen, A Lewis-Laurent, ... Molecular pharmaceutics 19 (6), 1839-1852, 2022 | 5 | 2022 |
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A β 16− 22 β _ 16-22 E Smorodina, B Kav, H Fatafta, B Strodel Proteins: Structure, Function, and Bioinformatics, 2023 | 4 | 2023 |
Interplay of Trans- and Cis-Interactions of Glycolipids in Membrane Adhesion B Kav, B Demé, C Gege, M Tanaka, E Schneck, TR Weikl Frontiers in molecular biosciences 8, 754654, 2021 | 4 | 2021 |
Does the inclusion of electronic polarisability lead to a better modelling of peptide aggregation? B Kav, B Strodel RSC advances 12 (32), 20829-20837, 2022 | 3 | 2022 |
Function changing mutations in glucocorticoid receptor evolution correlate with their relevance to mode coupling B Kav, M Öztürk, A Kabakçιoğlu Proteins: Structure, Function, and Bioinformatics 84 (5), 655-665, 2016 | 3 | 2016 |
Evaluating polarizable biomembrane simulations against experiments HS Antila, S Dixit, B Kav, JJ Madsen, MS Miettinen, OHS Ollila Journal of Chemical Theory and Computation, 2024 | 2 | 2024 |
Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations B Kav, TR Weikl, E Schneck The Journal of Physical Chemistry B 127 (18), 4081-4089, 2023 | 1 | 2023 |
A brief history of amyloid aggregation simulations H Fatafta, M Khaled, B Kav, OO Olubiyi, B Strodel Wiley Interdisciplinary Reviews: Computational Molecular Science 14 (1), e1703, 2024 | | 2024 |
NMRlipids Databank makes data-driven analysis of biomembrane properties accessible for all S Ollila, A Kiirikki, H Antila, L Bort, P Buslaev, F Favela-Rosales, ... | | 2023 |
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A [Formula: see text] E Smorodina, B Kav, H Fatafta, B Strodel Proteins, 0 | | |
SUPPORTING INFORMATION: Headgroup Structure and Cation Binding in Phosphatidylserine Lipid Bilayers H Antila, P Buslaev, F Favela-Rosales, TM Ferreira, I Gushchin, ... | | |