| Root litter decomposition slows with soil depth CEH Pries, BN Sulman, C West, C O'Neill, E Poppleton, RC Porras, ... Soil Biology and Biochemistry 125, 103-114, 2018 | 125 | 2018 |
| Design, optimization, and analysis of large DNA and RNA nanostructures through interactive visualization, editing, and molecular simulation E Poppleton, J Bohlin, M Matthies, S Sharma, F Zhang, P Šulc Nucleic Acids Research 48 (12), e72, 2020 | 123 | 2020 |
| Meta-DNA structures G Yao, F Zhang, F Wang, T Peng, H Liu, E Poppleton, P Šulc, S Jiang, ... Nature chemistry 12 (11), 1067-1075, 2020 | 120 | 2020 |
| Tacoxdna: A user‐friendly web server for simulations of complex DNA structures, from single strands to origami A Suma, E Poppleton, M Matthies, P Šulc, F Romano, AA Louis, JPK Doye, ... Journal of computational chemistry 40 (29), 2586-2595, 2019 | 77 | 2019 |
| OxDNA. org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures E Poppleton, R Romero, A Mallya, L Rovigatti, P Šulc Nucleic acids research 49 (W1), W491-W498, 2021 | 63 | 2021 |
| Design and simulation of DNA, RNA and hybrid protein–nucleic acid nanostructures with oxView J Bohlin, M Matthies, E Poppleton, J Procyk, A Mallya, H Yan, P Šulc Nature protocols 17 (8), 1762-1788, 2022 | 53 | 2022 |
| Triangulated wireframe structures assembled using single-stranded DNA tiles M Matthies, NP Agarwal, E Poppleton, FM Joshi, P Sulc, TL Schmidt Acs Nano 13 (2), 1839-1848, 2019 | 27 | 2019 |
| Coarse-grained nucleic acid–protein model for hybrid nanotechnology J Procyk, E Poppleton, P Šulc Soft Matter 17 (13), 3586-3593, 2021 | 23 | 2021 |
| Nanobase. org: a repository for DNA and RNA nanostructures E Poppleton, A Mallya, S Dey, J Joseph, P Šulc Nucleic acids research 50 (D1), D246-D252, 2022 | 22 | 2022 |
| Effects of flexibility of the α2 chain of type I collagen on collagenase cleavage A Mekkat, E Poppleton, B An, R Visse, H Nagase, DL Kaplan, B Brodsky, ... Journal of structural biology 203 (3), 247-254, 2018 | 22 | 2018 |
| The oxDNA coarse-grained model as a tool to simulate DNA origami JPK Doye, H Fowler, D Prešern, J Bohlin, L Rovigatti, F Romano, P Šulc, ... DNA and RNA Origami: Methods and Protocols, 93-112, 2023 | 21 | 2023 |
| oxDNA: coarse-grained simulations of nucleic acids made simple E Poppleton, M Matthies, D Mandal, F Romano, P Šulc, L Rovigatti Journal of Open Source Software 8 (81), 4693, 2023 | 17 | 2023 |
| Enzymatic phosphorylation of Ser in a type I collagen peptide Y Qiu, E Poppleton, A Mekkat, H Yu, S Banerjee, SE Wiley, JE Dixon, ... Biophysical Journal 115 (12), 2327-2335, 2018 | 17 | 2018 |
| A rhythmically pulsing leaf-spring DNA-origami nanoengine that drives a passive follower M Centola, E Poppleton, S Ray, M Centola, R Welty, J Valero, NG Walter, ... Nature nanotechnology 19 (2), 226-236, 2024 | 9 | 2024 |
| RNA origami: design, simulation and application E Poppleton, N Urbanek, T Chakraborty, A Griffo, L Monari, K Göpfrich RNA biology 20 (1), 510-524, 2023 | 9 | 2023 |
| Unified nanotechnology format: one way to store them all D Kuťák, E Poppleton, H Miao, P Šulc, I Barišić Molecules 27 (1), 63, 2021 | 8 | 2021 |
| Expertrna: A new framework for RNA secondary structure prediction M Liu, E Poppleton, G Pedrielli, P Šulc, DP Bertsekas INFORMS Journal on Computing 34 (5), 2464-2484, 2022 | 5 | 2022 |
| Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein–DNA Nanostructures RP Narayanan, J Procyk, P Nandi, A Prasad, Y Xu, E Poppleton, ... ACS nano 16 (9), 14086-14096, 2022 | 4 | 2022 |
| ANNaMo: Coarse-grained modeling for folding and assembly of RNA and DNA systems F Tosti Guerra, E Poppleton, P Šulc, L Rovigatti The Journal of Chemical Physics 160 (20), 2024 | | 2024 |
| DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes Q Lu, Y Xu, E Poppleton, K Zhou, P Sulc, N Stephanopoulos, Y Ke Nano Letters 24 (5), 1703-1709, 2024 | | 2024 |
Petr ŠulcArizona State University在 asu.edu 的电子邮件经过验证
