| dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation L Huang, H Zhang, P Wu, S Entwistle, X Li, T Yohe, H Yi, Z Yang, Y Yin Nucleic Acids Research 46 (D1), D516-D521, 2018 | 241 | 2018 |
| dbCAN-PUL: a database of experimentally characterized CAZyme gene clusters and their substrates C Ausland, J Zheng, H Yi, B Yang, T Li, X Feng, B Zheng, Y Yin Nucleic Acids Research 49 (D1), D523-D528, 2021 | 72 | 2021 |
| AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses H Yi, L Huang, B Yang, J Gomez, H Zhang, Y Yin Nucleic acids research 48 (W1), W358-W365, 2020 | 55 | 2020 |
| AcrDB: a database of anti-CRISPR operons in prokaryotes and viruses L Huang, B Yang, H Yi, A Asif, J Wang, T Lithgow, H Zhang, FAA Minhas, ... Nucleic Acids Research 49 (D1), D622-D629, 2021 | 33 | 2021 |
| Exchangeable neural ode for set modeling Y Li, H Yi, C Bender, S Shan, JB Oliva Advances in Neural Information Processing Systems 33, 6936-6946, 2020 | 32 | 2020 |
| Detecting hidden batch factors through data-adaptive adjustment for biological effects H Yi, AT Raman, H Zhang, GI Allen, Z Liu Bioinformatics 34 (7), 1141-1147, 2018 | 20 | 2018 |
| CytoSet: Predicting clinical outcomes via set-modeling of cytometry data H Yi, N Stanley ACM International Conference on Bioinformatics, Computational Biology and …, 2021 | 10 | 2021 |
| Transparent single-cell set classification with kernel mean embeddings S Shan, VA Baskaran, H Yi, J Ranek, N Stanley, JB Oliva Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | 9 | 2022 |
| Benchmarking differential abundance methods for finding condition-specific prototypical cells in multi-sample single-cell datasets H Yi, A Plotkin, N Stanley Genome Biology 25 (1), 9, 2024 | 5 | 2024 |
| COBRAC: a fast implementation of convex biclustering with compression H Yi, L Huang, G Mishne, EC Chi Bioinformatics 37 (20), 3667-3669, 2021 | 4 | 2021 |
| Scalable algorithms for convex clustering W Zhou, H Yi, G Mishne, E Chi 2021 IEEE Data Science and Learning Workshop (DSLW), 1-6, 2021 | 4 | 2021 |
| CytoEMD: detecting and visualizing between-sample variation in relation to phenotype with earth mover's distance H Yi, N Stanley Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | 2 | 2022 |
| GDASC: a GPU parallel-based web server for detecting hidden batch factors X Wang, H Yi, J Wang, Z Liu, Y Yin, H Zhang Bioinformatics 36 (14), 4211-4213, 2020 | 2 | 2020 |
| Sequential quadratic programming-based fast path planning algorithm subject to no-fly zone constraints W Liu, S Ma, M Sun, H Yi, Z Wang, Z Chen Engineering Optimization 48 (8), 1401-1418, 2016 | 2 | 2016 |
| scLKME: A Landmark-based Approach for Generating Multi-cellular Sample Embeddings from Single-cell Data H Yi, N Stanley bioRxiv, 2023 | 1 | 2023 |
| Conditional Similarity Triplets Enable Covariate-Informed Representations of Single-Cell Data CJ Chen, H Yi, N Stanley arXiv preprint arXiv:2406.08638, 2024 | | 2024 |
| SET-BASED MODELING AND APPLICATIONS IN SINGLE-CELL BIOINFORMATICS H Yi | | 2024 |
| Carbohydrate-active enzyme annotation in microbiomes using dbCAN J Zheng, L Huang, H Yi, Y Yan, X Zhang, J Akresi, Y Yin bioRxiv, 2024.01. 10.575125, 2024 | | 2024 |
| Interpretable Single-Cell Set Classification with Kernel Mean Embeddings S Shan, V Baskaran, H Yi, J Ranek, N Stanley, J Oliva arXiv preprint arXiv:2201.07322, 2022 | | 2022 |
Yanbin YinProfessor of University of Nebraska - Lincoln在 unl.edu 的电子邮件经过验证
