Oncogenic signaling pathways in the cancer genome atlas F Sanchez-Vega, M Mina, J Armenia, WK Chatila, A Luna, KC La, ... Cell 173 (2), 321-337. e10, 2018 | 2038 | 2018 |
Driver fusions and their implications in the development and treatment of human cancers Q Gao, WW Liang, SM Foltz, G Mutharasu, RG Jayasinghe, S Cao, ... Cell reports 23 (1), 227-238. e3, 2018 | 404 | 2018 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 341 | 2019 |
ClonEvol: clonal ordering and visualization in cancer sequencing HX Dang, BS White, SM Foltz, CA Miller, J Luo, RC Fields, CA Maher Annals of oncology 28 (12), 3076-3082, 2017 | 119 | 2017 |
Systematic discovery of complex insertions and deletions in human cancers K Ye, J Wang, R Jayasinghe, EW Lameijer, JF McMichael, J Ning, ... Nature medicine 22 (1), 97-104, 2016 | 110 | 2016 |
Co-evolution of tumor and immune cells during progression of multiple myeloma R Liu, Q Gao, SM Foltz, JS Fowles, L Yao, JT Wang, S Cao, H Sun, ... Nature communications 12 (1), 2559, 2021 | 63 | 2021 |
Proteogenomic characterization of ovarian HGSC implicates mitotic kinases, replication stress in observed chromosomal instability JE McDermott, OA Arshad, VA Petyuk, Y Fu, MA Gritsenko, TR Clauss, ... Cell reports medicine 1 (1), 2020 | 51 | 2020 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 180 (1), 207, 2020 | 46 | 2020 |
Rare, low frequency and common coding variants in CHRNA5 and their contribution to nicotine dependence in European and African Americans E Olfson, NL Saccone, EO Johnson, LS Chen, R Culverhouse, K Doheny, ... Molecular psychiatry 21 (5), 601-607, 2016 | 44 | 2016 |
Evolution and structure of clinically relevant gene fusions in multiple myeloma SM Foltz, Q Gao, CJ Yoon, H Sun, L Yao, Y Li, RG Jayasinghe, S Cao, ... Nature communications 11 (1), 2666, 2020 | 26 | 2020 |
Geographic analysis of urologist density and prostate cancer mortality in the United States N Yao, SM Foltz, AY Odisho, DC Wheeler PloS one 10 (6), e0131578, 2015 | 21 | 2015 |
MIRMMR: binary classification of microsatellite instability using methylation and mutations SM Foltz, WW Liang, M Xie, L Ding Bioinformatics 33 (23), 3799-3801, 2017 | 19 | 2017 |
OpenPBTA: The Open Pediatric Brain Tumor Atlas JA Shapiro, KS Gaonkar, SJ Spielman, CL Savonen, CJ Bethell, R Jin, ... Cell Genomics, 2023 | 10* | 2023 |
Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously SM Foltz, CS Greene, JN Taroni Communications Biology 6 (1), 222, 2023 | 3 | 2023 |
Myeloma Cell Associated Therapeutic Protein Discovery Using Single Cell RNA-Seq Data L Yao, RG Jayasinghe, T Wang, J O'Neal, R Liu, MP Rettig, CF Tsai, ... Blood 136, 4-5, 2020 | 1 | 2020 |
Single-cell transcriptomic and proteomic diversity in multiple myeloma RG Jayasinghe, Y Wu, Y Zhu, R Liu, MA Fiala, DR Kohnen, CF Tsai, ... Blood 134, 5531, 2019 | 1 | 2019 |
Single-Cell Discovery and Multiomic Characterization of Therapeutic Targets in Multiple Myeloma L Yao, JT Wang, RG Jayasinghe, J O'Neal, CF Tsai, MP Rettig, Y Song, ... Cancer research 83 (8), 1214-1233, 2023 | | 2023 |
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples WU Meyerson, LJ Dursi, LB Wang, G Dong, WW Liang, A Weerasinghe, ... Nature Publishing Group UK, 2020 | | 2020 |
Multi-omics Integration for Gene Fusion Discovery and Somatic Mutation Haplotyping in Cancer SM Foltz Washington University in St. Louis, 2020 | | 2020 |
Fusion gene detection across a large cohort of multiple myeloma patients S Foltz, Q Gao, C Yoon, L Yao, H Sun, R Jayasinghe, S Cao, M Fiala, ... Clinical Lymphoma, Myeloma and Leukemia 19 (10), e64-e65, 2019 | | 2019 |