| Transcriptional landscape of repetitive elements in normal and cancer human cells SW Criscione, Y Zhang, W Thompson, JM Sedivy, N Neretti BMC genomics 15, 1-17, 2014 | 306 | 2014 |
| Reorganization of chromosome architecture in replicative cellular senescence SW Criscione, M De Cecco, B Siranosian, Y Zhang, JA Kreiling, ... Science advances 2 (2), e1500882, 2016 | 150 | 2016 |
| Pathogenic citrulline‐multispecific B cell receptor clades in rheumatoid arthritis PJ Titcombe, G Wigerblad, N Sippl, N Zhang, AK Shmagel, P Sahlström, ... Arthritis & rheumatology 70 (12), 1933-1945, 2018 | 91 | 2018 |
| Scalable preprocessing for sparse scRNA-seq data exploiting prior knowledge S Mukherjee, Y Zhang, J Fan, G Seelig, S Kannan Bioinformatics 34 (13), i124-i132, 2018 | 19 | 2018 |
| CellMeSH: probabilistic cell-type identification using indexed literature S Mao, Y Zhang, G Seelig, S Kannan Bioinformatics 38 (5), 1393-1402, 2022 | 9 | 2022 |
| UNCURL-app: Interactive database-driven analysis of single cell RNA sequencing data Y Zhang, S Mao, S Mukherjee, S Kannan, G Seelig April, 2020 | 4 | 2020 |
| Prior knowledge and sampling model informed learning with single cell rna-seq data S Mukherjee, Y Zhang, S Kannan, G Seelig bioRxiv, 142398, 2017 | 3 | 2017 |
| A framework towards digital twins for type 2 diabetes Y Zhang, G Qin, B Aguilar, N Rappaport, JT Yurkovich, L Pflieger, ... Frontiers in Digital Health 6, 1336050, 2024 | 1 | 2024 |
| Interactive Analysis of Single-Cell RNA-Sequencing Data Y Zhang University of Washington, 2022 | | 2022 |
