| Somatic retrotransposition alters the genetic landscape of the human brain JK Baillie, MW Barnett, KR Upton, DJ Gerhardt, TA Richmond, F De Sapio, ... Nature 479 (7374), 534-537, 2011 | 829 | 2011 |
| Targeted RNA sequencing reveals the deep complexity of the human transcriptome TR Mercer, DJ Gerhardt, ME Dinger, J Crawford, C Trapnell, JA Jeddeloh, ... Nature biotechnology 30 (1), 99-104, 2012 | 560 | 2012 |
| Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma R Shukla, KR Upton, M Muñoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ... Cell 153 (1), 101-111, 2013 | 436 | 2013 |
| Ubiquitous L1 mosaicism in hippocampal neurons KR Upton, DJ Gerhardt, JS Jesuadian, SR Richardson, ... Cell 161 (2), 228-239, 2015 | 366 | 2015 |
| Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond M Mascher, TA Richmond, DJ Gerhardt, A Himmelbach, L Clissold, ... The Plant Journal 76 (3), 494-505, 2013 | 307 | 2013 |
| Phenotypic and genomic analyses of a fast neutron mutant population resource in soybean YT Bolon, WJ Haun, WW Xu, D Grant, MG Stacey, RT Nelson, ... Plant physiology 156 (1), 240-253, 2011 | 232 | 2011 |
| Structural variants in the soybean genome localize to clusters of biotic stress-response genes LK McHale, WJ Haun, WW Xu, PB Bhaskar, JE Anderson, DL Hyten, ... Plant physiology 159 (4), 1295-1308, 2012 | 219 | 2012 |
| Targeted sequencing for gene discovery and quantification using RNA CaptureSeq TR Mercer, MB Clark, J Crawford, ME Brunck, DJ Gerhardt, RJ Taft, ... Nature protocols 9 (5), 989-1009, 2014 | 192 | 2014 |
| The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82 WJ Haun, DL Hyten, WW Xu, DJ Gerhardt, TJ Albert, T Richmond, ... Plant physiology 155 (2), 645-655, 2011 | 188 | 2011 |
| Targeted re‐sequencing of the allohexaploid wheat exome MO Winfield, PA Wilkinson, AM Allen, GLA Barker, JA Coghill, A Burridge, ... Plant biotechnology journal 10 (6), 733-742, 2012 | 166 | 2012 |
| Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells S Klawitter, NV Fuchs, KR Upton, M Munoz-Lopez, R Shukla, J Wang, ... Nature communications 7 (1), 10286, 2016 | 148 | 2016 |
| Mutation discovery in mice by whole exome sequencing H Fairfield, GJ Gilbert, M Barter, RR Corrigan, M Curtain, Y Ding, ... Genome biology 12, 1-12, 2011 | 129 | 2011 |
| Heritable L1 retrotransposition in the mouse primordial germline and early embryo SR Richardson, P Gerdes, DJ Gerhardt, FJ Sanchez-Luque, GO Bodea, ... Genome research 27 (8), 1395-1405, 2017 | 110 | 2017 |
| Repeat subtraction‐mediated sequence capture from a complex genome Y Fu, NM Springer, DJ Gerhardt, K Ying, CT Yeh, W Wu, ... The Plant Journal 62 (5), 898-909, 2010 | 103 | 2010 |
| An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse L Daxinger, SK Harten, H Oey, T Epp, L Isbel, E Huang, N Whitelaw, ... Genome biology 14, 1-17, 2013 | 101 | 2013 |
| L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis SN Schauer, PE Carreira, R Shukla, DJ Gerhardt, P Gerdes, ... Genome research 28 (5), 639-653, 2018 | 92 | 2018 |
| Genomic DNA enrichment using sequence capture microarrays: a novel approach to discover sequence nucleotide polymorphisms (SNP) in Brassica napus L WE Clarke, IA Parkin, HA Gajardo, DJ Gerhardt, E Higgins, C Sidebottom, ... PloS one 8 (12), e81992, 2013 | 51 | 2013 |
| Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme PE Carreira, AD Ewing, G Li, SN Schauer, KR Upton, AC Fagg, S Morell, ... Mobile DNA 7, 1-14, 2016 | 39 | 2016 |
| Nucleotide polymorphism and copy number variant detection using exome capture and next‐generation sequencing in the polyploid grass Panicum virgatum J Evans, J Kim, KL Childs, B Vaillancourt, E Crisovan, A Nandety, ... The Plant Journal 79 (6), 993-1008, 2014 | 38 | 2014 |
| Changes in genome content generated via segregation of non‐allelic homologs S Liu, K Ying, CT Yeh, J Yang, R Swanson‐Wagner, W Wu, T Richmond, ... The Plant Journal 72 (3), 390-399, 2012 | 29 | 2012 |
