The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 375* | 2015 |
Structure and inhibition of microbiome β-glucuronidases essential to the alleviation of cancer drug toxicity BD Wallace, AB Roberts, RM Pollet, JD Ingle, KA Biernat, SJ Pellock, ... Chemistry & biology 22 (9), 1238-1249, 2015 | 262 | 2015 |
Unearthing the ecology of soil microorganisms using a high resolution DNA-SIP approach to explore cellulose and xylose metabolism in soil C Pepe-Ranney, AN Campbell, CN Koechli, S Berthrong, DH Buckley Frontiers in microbiology 7, 703, 2016 | 172 | 2016 |
Dynamics of microbial community composition and soil organic carbon mineralization in soil following addition of pyrogenic and fresh organic matter T Whitman, C Pepe-Ranney, A Enders, C Koechli, A Campbell, ... The ISME journal 10 (12), 2918-2930, 2016 | 163 | 2016 |
Non-cyanobacterial diazotrophs mediate dinitrogen fixation in biological soil crusts during early crust formation. C Pepe-Ranney, C Koechli, R Potrafka, C Andam, E Eggleston, ... ISMEJ, 2015 | 111 | 2015 |
Assessing fungal contributions to cellulose degradation in soil by using high-throughput stable isotope probing C Koechli, AN Campbell, C Pepe-Ranney, DH Buckley Soil Biology and Biochemistry 130, 150-158, 2019 | 87 | 2019 |
Hot spring siliceous stromatolites from Yellowstone National Park: assessing growth rate and laminae formation WM Berelson, FA Corsetti, C Pepe‐Ranney, DE Hammond, W Beaumont, ... Geobiology 9 (5), 411-424, 2011 | 87 | 2011 |
Cyanobacterial construction of hot spring siliceous stromatolites in Yellowstone National Park C Pepe‐Ranney, WM Berelson, FA Corsetti, M Treants, JR Spear Environmental Microbiology 14 (5), 1182-1197, 2012 | 78 | 2012 |
Hydrogen-isotopic variability in fatty acids from Yellowstone National Park hot spring microbial communities MR Osburn, AL Sessions, C Pepe-Ranney, JR Spear Geochimica et Cosmochimica Acta 75 (17), 4830-4845, 2011 | 71 | 2011 |
Diversification of Secondary Metabolite Biosynthetic Gene Clusters Coincides with Lineage Divergence in Streptomyces MJ Choudoir, C Pepe-Ranney, DH Buckley Antibiotics 7 (1), 12, 2018 | 48 | 2018 |
The microbial landscape of sea stars and the anatomical and interspecies variability of their microbiome EW Jackson, C Pepe-Ranney, SJ Debenport, DH Buckley, I Hewson Frontiers in microbiology 9, 1829, 2018 | 41 | 2018 |
Competitive exclusion and metabolic dependency among microorganisms structure the cellulose economy of an agricultural soil RC Wilhelm, C Pepe-Ranney, P Weisenhorn, M Lipton, DH Buckley MBio 12 (1), 10.1128/mbio. 03099-20, 2021 | 33 | 2021 |
A highly prevalent and pervasive densovirus discovered among sea stars from the North American Atlantic coast EW Jackson, C Pepe-Ranney, MR Johnson, DL Distel, I Hewson Applied and Environmental Microbiology 86 (6), e02723-19, 2020 | 26 | 2020 |
Microbial sequencing analyses suggest the presence of a fecal veneer on indoor climbing wall holds SL Bräuer, D Vuono, MJ Carmichael, C Pepe-Ranney, A Strom, ... Current microbiology 69, 681-689, 2014 | 19 | 2014 |
The effect of carbon subsidies on marine planktonic niche partitioning and recruitment during biofilm assembly C Pepe-Ranney, EK Hall Frontiers in Aquatic Microbiology, 2015 | 17 | 2015 |
Using metagenomics to reveal landscape scale patterns of denitrifiers in a montane forest ecosystem CA Roco, P Dörsch, JG Booth, C Pepe-Ranney, PM Groffman, TJ Fahey, ... Soil Biology and Biochemistry 138, 107585, 2019 | 16 | 2019 |
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Research 4, 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 11 | 2015 |
Surveying the sweetpotato rhizosphere, endophyte, and surrounding soil microbiomes at two North Carolina farms reveals underpinnings of sweetpotato microbiome community assembly C Pepe-Ranney, C Keyser, JK Trimble, B Bissinger Phytobiomes Journal 4 (1), 75-89, 2020 | 7 | 2020 |
NCBI’s virus discovery codeathon: building “FIVE”—The Federated Index of Viral Experiments API index J Martí-Carreras, AR Gener, SD Miller, AF Brito, CE Camacho, R Connor, ... Viruses 12 (12), 1424, 2020 | 4 | 2020 |
From biofilms to siliceous stromatolites: the interplay between microbial activity, hot spring chemistry and growth rate [abstract 118-12] WM Berelson, FA Corsetti, C Pepe-Ranney, JR Spear Proceedings of the 2008 Joint Meeting of the Geological Society of America …, 2008 | 2 | 2008 |