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| Soybean knowledge base (SoyKB): a web resource for integration of soybean translational genomics and molecular breeding T Joshi, MR Fitzpatrick, S Chen, Y Liu, H Zhang, RZ Endacott, ... Nucleic acids research 42 (D1), D1245-D1252, 2014 | 109 | 2014 |
| Phenotype prediction and genome-wide association study using deep convolutional neural network of soybean Y Liu, D Wang, F He, J Wang, T Joshi, D Xu Frontiers in genetics 10, 486384, 2019 | 104 | 2019 |
| Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing JV Maldonado dos Santos, B Valliyodan, T Joshi, SM Khan, Y Liu, J Wang, ... BMC genomics 17, 1-18, 2016 | 59 | 2016 |
| Plant-derived phosphocholine facilitates cellular uptake of anti-pulmonary fibrotic HJT-sRNA-m7 J Du, Z Liang, J Xu, Y Zhao, X Li, Y Zhang, D Zhao, R Chen, Y Liu, T Joshi, ... Science China Life Sciences 62, 309-320, 2019 | 57 | 2019 |
| TISMO: syngeneic mouse tumor database to model tumor immunity and immunotherapy response Z Zeng, CJ Wong, L Yang, N Ouardaoui, D Li, W Zhang, S Gu, Y Zhang, ... Nucleic acids research 50 (D1), D1391-D1397, 2022 | 55 | 2022 |
| Understanding genetic control of root system architecture in soybean: Insights into the genetic basis of lateral root number SJ Prince, B Valliyodan, H Ye, M Yang, S Tai, W Hu, M Murphy, ... Plant, cell & environment 42 (1), 212-229, 2019 | 52 | 2019 |
| Identification and evaluation of quantitative trait loci underlying resistance to multiple HG types of soybean cyst nematode in soybean PI 437655 Y Jiao, TD Vuong, Y Liu, C Meinhardt, Y Liu, T Joshi, PB Cregan, D Xu, ... Theoretical and applied genetics 128, 15-23, 2015 | 51 | 2015 |
| Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing B Valliyodan, AV Brown, J Wang, G Patil, Y Liu, PI Otyama, RT Nelson, ... Scientific data 8 (1), 1-9, 2021 | 45 | 2021 |
| Identification of quantitative trait loci underlying resistance to southern root-knot and reniform nematodes in soybean accession PI 567516C Y Jiao, TD Vuong, Y Liu, Z Li, J Noe, RT Robbins, T Joshi, D Xu, ... Molecular Breeding 35, 1-10, 2015 | 44 | 2015 |
| PGen: large-scale genomic variations analysis workflow and browser in SoyKB Y Liu, SM Khan, J Wang, M Rynge, Y Zhang, S Zeng, S Chen, ... BMC bioinformatics 17, 177-186, 2016 | 37 | 2016 |
| Mechanisms of response and resistance to combined decitabine and ipilimumab for advanced myeloid disease L Penter, Y Liu, JO Wolff, L Yang, L Taing, A Jhaveri, J Southard, M Patel, ... Blood 141 (15), 1817-1830, 2023 | 27 | 2023 |
| Developmental exposure of California mice to endocrine disrupting chemicals and potential effects on the microbiome-gut-brain axis at adulthood S Kaur, SJ Sarma, BL Marshall, Y Liu, JA Kinkade, MM Bellamy, J Mao, ... Scientific reports 10 (1), 10902, 2020 | 26 | 2020 |
| In-Situ Metabolomic Analysis of Setaria viridis Roots Colonized by Beneficial Endophytic Bacteria BJ Agtuca, SA Stopka, TR Tuleski, FP do Amaral, S Evans, Y Liu, D Xu, ... Molecular plant-microbe interactions 33 (2), 272-283, 2020 | 26 | 2020 |
| Early genistein exposure of California mice and effects on the gut microbiota–brain axis BL Marshall, Y Liu, MJ Farrington, J Mao, WG Helferich, AK Schenk, ... Journal of Endocrinology 242 (2), 139-157, 2019 | 21 | 2019 |
| Application of deep learning in genomic selection Y Liu, D Wang 2017 ieee international conference on bioinformatics and biomedicine (bibm …, 2017 | 20 | 2017 |
| Soybean transporter database: A comprehensive database for identification and exploration of natural variants in soybean transporter genes R Deshmukh, N Rana, Y Liu, S Zeng, G Agarwal, H Sonah, R Varshney, ... Physiologia Plantarum 171 (4), 756-770, 2021 | 14 | 2021 |
| Mice lacking uterine enhancer of zeste homolog 2 have transcriptomic changes associated with uterine epithelial proliferation AM Mesa, J Mao, MK Nanjappa, TI Medrano, S Tevosian, F Yu, J Kinkade, ... Physiological Genomics 52 (2), 81-95, 2020 | 10 | 2020 |
| Next generation resequencing of soybean germplasm for trait discovery on xsede using pegasus workflows and iplant infrastructure T Joshi, B Valliyodan, SM Khan, Y Liu, JVM dos Santos, Y Jiao, D Xu, ... XSEDE, 2014 | 9 | 2014 |
| Tutorial: integrative computational analysis of bulk RNA-sequencing data to characterize tumor immunity using RIMA L Yang, J Wang, J Altreuter, A Jhaveri, CJ Wong, L Song, J Fu, L Taing, ... Nature Protocols 18 (8), 2404-2414, 2023 | 6 | 2023 |
