Spatial, climate and ploidy factors drive genomic diversity and resilience in the widespread grass Themeda triandra CW Ahrens, EA James, AD Miller, F Scott, NC Aitken, AW Jones, ... Molecular Ecology 29 (20), 3872-3888, 2020 | 35 | 2020 |
Species-specific basecallers improve actual accuracy of nanopore sequencing in plants S Ferguson, T McLay, RL Andrew, JJ Bruhl, B Schwessinger, J Borevitz, ... Plant Methods 18 (1), 137, 2022 | 29 | 2022 |
Stabilisation of soil organic matter with rock dust partially counteracted by plants W Buss, H Hasemer, S Ferguson, J Borevitz Global Change Biology 30 (1), e17052, 2024 | 19 | 2024 |
Interspecies genome divergence is predominantly due to frequent small scale rearrangements in Eucalyptus S Ferguson, A Jones, K Murray, B Schwessinger, JO Borevitz Molecular Ecology 32 (6), 1271-1287, 2023 | 17 | 2023 |
Cost-conscious generation of multiplexed short-read DNA libraries for whole-genome sequencing A Jones, D Stanley, S Ferguson, B Schwessinger, J Borevitz, ... Plos one 18 (1), e0280004, 2023 | 16 | 2023 |
Plant genome evolution in the genus Eucalyptus is driven by structural rearrangements that promote sequence divergence S Ferguson, A Jones, K Murray, R Andrew, B Schwessinger, J Borevitz Genome Research 34 (4), 606-619, 2024 | 12 | 2024 |
Genomic determinants, architecture, and constraints in drought-related traits in Corymbia calophylla CW Ahrens, K Murray, RA Mazanec, S Ferguson, A Jones, DT Tissue, ... BMC genomics 25 (1), 640, 2024 | 6* | 2024 |
Soil organic carbon fractionation and metagenomics pipeline to link carbon content and stability with microbial composition–First results investigating fungal endophytes W Buss, R Sharma, S Ferguson, J Borevitz BioRxiv, 2021.12. 19.473394, 2021 | 6 | 2021 |
The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia AL Phillips, S Ferguson, NS Watson-Haigh, AW Jones, JO Borevitz, ... Scientific reports 12 (1), 10823, 2022 | 5 | 2022 |
Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus S Ferguson, A Jones, K Murray, RL Andrew, H Bothwell, B Schwessinger, ... | 4* | 2024 |
Plant assemble-Plant de novo genome assembly, scaffolding and annotation for genomic studies S Ferguson, A Jones, J Borevitz | 4 | 2022 |
CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data AL Phillips, S Ferguson, RA Burton, NS Watson-Haigh PLOS Computational Biology 20 (2), e1011870, 2024 | 2 | 2024 |
The Genomics for Australian Plants (GAP) framework initiative–developing genomic resources for understanding the evolution and conservation of the Australian flora. L Simpson, D Cantrill, M Byrne, T Allnutt, G King, M Lum, Z Al Bkhetan, ... EcoEvoRxiv, 2024 | 1 | 2024 |
A telomere-to-telomere Eucalyptus regnans genome: unveiling haplotype variance in structure and genes within one of the world’s tallest trees S Ferguson, YD Bar-Ness, J Borevitz, A Jones BMC genomics 25 (1), 913, 2024 | | 2024 |