Detection of long non–coding RNA homology, a comparative study on alignment and alignment–free metrics TMR Noviello, A Di Liddo, GM Ventola, A Spagnuolo, S D’Aniello, ... BMC bioinformatics 19, 1-12, 2018 | 46 | 2018 |
A combined computational pipeline to detect circular RNAs in human cancer cells under hypoxic stress A Di Liddo, C de Oliveira Freitas Machado, S Fischer, S Ebersberger, ... Journal of molecular cell biology 11 (10), 829-844, 2019 | 29 | 2019 |
Poison cassette exon splicing of SRSF6 regulates nuclear speckle dispersal and the response to hypoxia C de Oliveira Freitas Machado, M Schafranek, M Brüggemann, ... Nucleic Acids Research 51 (2), 870-890, 2023 | 28 | 2023 |
Muscleblind-like 2 controls the hypoxia response of cancer cells S Fischer, A Di Liddo, K Taylor, JS Gerhardus, K Sobczak, K Zarnack, ... Rna 26 (5), 648-663, 2020 | 20 | 2020 |
FUBP1 is a general splicing factor facilitating 3′ splice site recognition and splicing of long introns S Ebersberger, C Hipp, MM Mulorz, A Buchbender, D Hubrich, HS Kang, ... Molecular cell 83 (15), 2653-2672. e15, 2023 | 13 | 2023 |
An unbiased AAV-STARR-seq screen revealing the enhancer activity map of genomic regions in the mouse brain in vivo YC Chan, E Kienle, M Oti, A Di Liddo, M Mendez-Lago, DF Aschauer, ... Scientific reports 13 (1), 6745, 2023 | 11 | 2023 |