Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1296 | 2020 |
Sparse partial least squares regression for simultaneous dimension reduction and variable selection H Chun, S Keleş Journal of the Royal Statistical Society Series B: Statistical Methodology …, 2010 | 1020 | 2010 |
Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy T Fujiwara, H O'Geen, S Keles, K Blahnik, AK Linnemann, YA Kang, ... Molecular cell 36 (4), 667-681, 2009 | 414 | 2009 |
GATA switches as developmental drivers EH Bresnick, HY Lee, T Fujiwara, KD Johnson, S Keles Journal of Biological Chemistry 285 (41), 31087-31093, 2010 | 329 | 2010 |
Rhinovirus-induced modulation of gene expression in bronchial epithelial cells from subjects with asthma YA Bochkov, KM Hanson, S Keles, RA Brockman-Schneider, NN Jarjour, ... Mucosal immunology 3 (1), 69-80, 2010 | 324 | 2010 |
The bone morphogenetic protein 1/Tolloid-like metalloproteinases DR Hopkins, S Keles, DS Greenspan Matrix Biology 26 (7), 508-523, 2007 | 324 | 2007 |
Sparse partial least squares classification for high dimensional data D Chung, S Keles Statistical applications in genetics and molecular biology 9 (1), 2010 | 261 | 2010 |
Effects of sleep and wake on oligodendrocytes and their precursors M Bellesi, M Pfister-Genskow, S Maret, S Keles, G Tononi, C Cirelli Journal of Neuroscience 33 (36), 14288-14300, 2013 | 250 | 2013 |
Rho directs widespread termination of intragenic and stable RNA transcription JM Peters, RA Mooney, PF Kuan, JL Rowland, S Keleş, R Landick Proceedings of the National Academy of Sciences 106 (36), 15406-15411, 2009 | 233 | 2009 |
Cis-element mutated in GATA2-dependent immunodeficiency governs hematopoiesis and vascular integrity KD Johnson, AP Hsu, MJ Ryu, J Wang, X Gao, ME Boyer, Y Liu, Y Lee, ... The Journal of clinical investigation 122 (10), 3692-3704, 2012 | 217 | 2012 |
Genome-scale Analysis of Escherichia coli FNR Reveals Complex Features of Transcription Factor Binding KS Myers, H Yan, IM Ong, D Chung, K Liang, F Tran, S Keleş, R Landick, ... PLoS genetics 9 (6), e1003565, 2013 | 207 | 2013 |
Chemical-genomic dissection of the CTD code JR Tietjen, DW Zhang, JB Rodríguez-Molina, BE White, MS Akhtar, ... Nature structural & molecular biology 17 (9), 1154-1161, 2010 | 189 | 2010 |
Identification of regulatory elements using a feature selection method S Keleş, M van der Laan, MB Eisen Bioinformatics 18 (9), 1167-1175, 2002 | 173 | 2002 |
Asymptotic optimality of likelihood-based cross-validation MJ van der Laan, S Dudoit, S Keles Statistical applications in genetics and molecular biology 3 (1), 2004 | 169 | 2004 |
Autophagy driven by a master regulator of hematopoiesis YA Kang, R Sanalkumar, H O'geen, AK Linnemann, CJ Chang, ... Molecular and cellular biology, 2012 | 160 | 2012 |
A statistical framework for the analysis of ChIP-Seq data PF Kuan, D Chung, G Pan, JA Thomson, R Stewart, S Keleş Journal of the American Statistical Association 106 (495), 891-903, 2011 | 144 | 2011 |
Normalization of ChIP-seq data with control K Liang, S Keleş BMC bioinformatics 13, 1-10, 2012 | 139 | 2012 |
Expression profiling of GABAergic motor neurons in Caenorhabditis elegans H Cinar, S Keles, Y Jin Current Biology 15 (4), 340-346, 2005 | 132 | 2005 |
Expression quantitative trait loci mapping with multivariate sparse partial least squares regression H Chun, S Keleş Genetics 182 (1), 79-90, 2009 | 130 | 2009 |
Genetic framework for GATA factor function in vascular biology AK Linnemann, H O’Geen, S Keles, PJ Farnham, EH Bresnick Proceedings of the National Academy of Sciences 108 (33), 13641-13646, 2011 | 123 | 2011 |