Expression and mutation patterns of PBRM1, BAP1 and SETD2 mirror specific evolutionary subtypes in clear cell renal cell carcinoma S Bihr, R Ohashi, AL Moore, JH Rüschoff, C Beisel, T Hermanns, ... Neoplasia 21 (2), 247-256, 2019 | 69 | 2019 |
Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers AL Hofmann, J Behr, J Singer, J Kuipers, C Beisel, P Schraml, H Moch, ... BMC bioinformatics 18, 1-15, 2017 | 52 | 2017 |
NGS-pipe: a flexible, easily extendable and highly configurable framework for NGS analysis J Singer, HJ Ruscheweyh, AL Hofmann, T Thurnherr, F Singer, ... Bioinformatics 34 (1), 107-108, 2018 | 35 | 2018 |
A switch in transcription and cell fate governs the onset of an epigenetically-deregulated tumor in Drosophila J Torres, R Monti, AL Moore, M Seimiya, Y Jiang, N Beerenwinkel, ... Elife 7, e32697, 2018 | 20 | 2018 |
Convergent network effects along the axis of gene expression during prostate cancer progression K Charmpi, T Guo, Q Zhong, U Wagner, R Sun, NC Toussaint, CE Fritz, ... Genome Biology 21, 1-31, 2020 | 19 | 2020 |
Multi-omics data integration reveals novel drug targets in hepatocellular carcinoma C Dimitrakopoulos, SK Hindupur, M Colombi, D Liko, CKY Ng, ... BMC genomics 22, 1-26, 2021 | 17 | 2021 |
Spatial distribution of private gene mutations in clear cell renal cell carcinoma AL Moore, AA Batavia, J Kuipers, J Singer, E Burcklen, P Schraml, ... Cancers 13 (9), 2163, 2021 | 12 | 2021 |
Statistical tests for intra-tumour clonal co-occurrence and exclusivity J Kuipers, AL Moore, K Jahn, P Schraml, F Wang, K Morita, PA Futreal, ... PLoS computational biology 17 (12), e1009036, 2021 | 11 | 2021 |
Intra-tumor heterogeneity and clonal exclusivity in renal cell carcinoma AL Moore, J Kuipers, J Singer, E Burcklen, P Schraml, C Beisel, H Moch, ... BioRxiv, 2018 | 5 | 2018 |
Proteogenomic heterogeneity of localized human prostate cancer progression K Charmpi, T Guo, Q Zhong, U Wagner, R Sun, NC Toussaint, CE Fritz, ... bioRxiv, 2020.02. 16.950378, 2020 | 2 | 2020 |
A statistical test for clonal exclusivity in tumour evolution J Kuipers, AL Moore, K Jahn, P Schraml, F Wang, K Morita, ... bioRxiv, 2021.05. 05.442732, 2021 | | 2021 |
Package ‘GeneAccord’ AL Moore, J Kuipers, N Beerenwinkel, MAL Moore | | 2021 |
Dynamic changes of genomic and transcriptomic tumor diversity during melanoma progression AL Moore, C Dimitrakopoulos, S Flückiger-Mangual, L Frischknecht, ... bioRxiv, 2021.03. 18.435947, 2021 | | 2021 |
Author response: A switch in transcription and cell fate governs the onset of an epigenetically-deregulated tumor in Drosophila J Torres, R Monti, AL Moore, M Seimiya, Y Jiang, N Beerenwinkel, ... | | |