| α-Helical stabilization by side chain shielding of backbone hydrogen bonds AE García, KY Sanbonmatsu Proceedings of the National Academy of Sciences 99 (5), 2782-2787, 2002 | 539 | 2002 |
| Exploring the energy landscape of a β hairpin in explicit solvent AE Garcia, KY Sanbonmatsu Proteins: Structure, Function, and Bioinformatics 42 (3), 345-354, 2001 | 526* | 2001 |
| An all‐atom structure‐based potential for proteins: bridging minimal models with all‐atom empirical forcefields PC Whitford, JK Noel, S Gosavi, A Schug, KY Sanbonmatsu, JN Onuchic Proteins: Structure, Function, and Bioinformatics 75 (2), 430-441, 2009 | 398 | 2009 |
| Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites AH Ratje, J Loerke, A Mikolajka, M Brünner, PW Hildebrand, AL Starosta, ... Nature 468 (7324), 713-716, 2010 | 391 | 2010 |
| SMOG@ ctbp: simplified deployment of structure-based models in GROMACS JK Noel, PC Whitford, KY Sanbonmatsu, JN Onuchic Nucleic acids research 38 (suppl_2), W657-W661, 2010 | 344 | 2010 |
| Simulating movement of tRNA into the ribosome during decoding KY Sanbonmatsu, S Joseph, CS Tung Proceedings of the National Academy of Sciences 102 (44), 15854-15859, 2005 | 343 | 2005 |
| Structure of Met‐enkephalin in explicit aqueous solution using replica exchange molecular dynamics KY Sanbonmatsu, AE García Proteins: Structure, Function, and Bioinformatics 46 (2), 225-234, 2002 | 328 | 2002 |
| Structural architecture of the human long non-coding RNA, steroid receptor RNA activator IV Novikova, SP Hennelly, KY Sanbonmatsu Nucleic acids research 40 (11), 5034-5051, 2012 | 293 | 2012 |
| Peptide folding simulations S Gnanakaran, H Nymeyer, J Portman, KY Sanbonmatsu, AE Garcıa Current opinion in structural biology 13 (2), 168-174, 2003 | 258 | 2003 |
| High performance computing in biology: multimillion atom simulations of nanoscale systems KY Sanbonmatsu, CS Tung Journal of structural biology 157 (3), 470-480, 2007 | 233 | 2007 |
| Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways PC Whitford, P Geggier, RB Altman, SC Blanchard, JN Onuchic, ... Rna 16 (6), 1196-1204, 2010 | 213 | 2010 |
| Free state conformational sampling of the SAM-I riboswitch aptamer domain CD Stoddard, RK Montange, SP Hennelly, RP Rambo, KY Sanbonmatsu, ... Structure 18 (7), 787-797, 2010 | 202 | 2010 |
| A G-rich motif in the lncRNA braveheart interacts with a zinc-finger transcription factor to specify the cardiovascular lineage Z Xue, S Hennelly, B Doyle, AA Gulati, IV Novikova, KY Sanbonmatsu, ... Molecular cell 64 (1), 37-50, 2016 | 178 | 2016 |
| Rise of the RNA machines: exploring the structure of long non-coding RNAs IV Novikova, SP Hennelly, CS Tung, KY Sanbonmatsu Journal of molecular biology 425 (19), 3731-3746, 2013 | 156 | 2013 |
| Sizing up long non-coding RNAs: do lncRNAs have secondary and tertiary structure? IV Novikova, SP Hennelly, KY Sanbonmatsu Bioarchitecture 2 (6), 189-199, 2012 | 151 | 2012 |
| COOLAIR antisense RNAs form evolutionarily conserved elaborate secondary structures EJ Hawkes, SP Hennelly, IV Novikova, JA Irwin, C Dean, ... Cell reports 16 (12), 3087-3096, 2016 | 145 | 2016 |
| Spontaneous formation of the unlocked state of the ribosome is a multistep process JB Munro, RB Altman, CS Tung, JHD Cate, KY Sanbonmatsu, ... Proceedings of the National Academy of Sciences 107 (2), 709-714, 2010 | 140 | 2010 |
| Navigating the ribosome's metastable energy landscape JB Munro, KY Sanbonmatsu, CMT Spahn, SC Blanchard Trends in biochemical sciences 34 (8), 390-400, 2009 | 137 | 2009 |
| Regulation of the mammalian elongation cycle by subunit rolling: a eukaryotic-specific ribosome rearrangement TV Budkevich, J Giesebrecht, E Behrmann, J Loerke, DJF Ramrath, ... Cell 158 (1), 121-131, 2014 | 134 | 2014 |
| Biomolecular dynamics: order–disorder transitions and energy landscapes PC Whitford, KY Sanbonmatsu, JN Onuchic Reports on Progress in Physics 75 (7), 076601, 2012 | 133 | 2012 |
Jose OnuchicCTBP Rice University在 rice.edu 的电子邮件经过验证
