Multi-site assessment of the precision and reproducibility of multiple reaction monitoring–based measurements of proteins in plasma TA Addona, SE Abbatiello, B Schilling, SJ Skates, DR Mani, DM Bunk, ... Nature biotechnology 27 (7), 633-641, 2009 | 1154 | 2009 |
Repeatability and reproducibility in proteomic identifications by liquid chromatography− tandem mass spectrometry DL Tabb, L Vega-Montoto, PA Rudnick, AM Variyath, AJL Ham, DM Bunk, ... Journal of proteome research 9 (2), 761-776, 2010 | 633 | 2010 |
Comparison of principal components regression and partial least squares regression through generic simulations of complex mixtures PD Wentzell, LV Montoto Chemometrics and intelligent laboratory systems 65 (2), 257-279, 2003 | 241 | 2003 |
Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses PA Rudnick, KR Clauser, LE Kilpatrick, DV Tchekhovskoi, P Neta, ... Molecular & Cellular Proteomics 9 (2), 225-241, 2010 | 202 | 2010 |
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance AG Paulovich, D Billheimer, AJL Ham, L Vega-Montoto, PA Rudnick, ... Molecular & Cellular Proteomics 9 (2), 242-254, 2010 | 184 | 2010 |
Derivative preprocessing and optimal corrections for baseline drift in multivariate calibration CD Brown, L Vega-Montoto, PD Wentzell Applied Spectroscopy 54 (7), 1055-1068, 2000 | 172 | 2000 |
Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment S Dasari, MC Chambers, MA Martinez, KL Carpenter, AJL Ham, ... Journal of proteome research 11 (3), 1686-1695, 2012 | 76 | 2012 |
Lysyl oxidase-like-2 cross-links collagen IV of glomerular basement membrane C Añazco, AJ López-Jiménez, M Rafi, L Vega-Montoto, MZ Zhang, ... Journal of Biological Chemistry 291 (50), 25999-26012, 2016 | 75 | 2016 |
Integrin-mediated type II TGF-β receptor tyrosine dephosphorylation controls SMAD-dependent profibrotic signaling X Chen, H Wang, HJ Liao, W Hu, L Gewin, G Mernaugh, S Zhang, ... The Journal of clinical investigation 124 (8), 3295-3310, 2014 | 75 | 2014 |
Comprehensive characterization of glycosylation and hydroxylation of basement membrane collagen IV by high-resolution mass spectrometry T Basak, L Vega-Montoto, LJ Zimmerman, DL Tabb, BG Hudson, ... Journal of proteome research 15 (1), 245-258, 2016 | 74 | 2016 |
QuaMeter: multivendor performance metrics for LC–MS/MS proteomics instrumentation ZQ Ma, KO Polzin, S Dasari, MC Chambers, B Schilling, BW Gibson, ... Analytical chemistry 84 (14), 5845-5850, 2012 | 64 | 2012 |
Methods for systematic investigation of measurement error covariance matrices MN Leger, L Vega-Montoto, PD Wentzell Chemometrics and Intelligent Laboratory Systems 77 (1-2), 181-205, 2005 | 62 | 2005 |
QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statistics X Wang, MC Chambers, LJ Vega-Montoto, DM Bunk, SE Stein, DL Tabb Analytical chemistry 86 (5), 2497-2509, 2014 | 55 | 2014 |
ScanRanker: Quality assessment of tandem mass spectra via sequence tagging ZQ Ma, MC Chambers, AJL Ham, KL Cheek, CW Whitwell, HR Aerni, ... Journal of proteome research 10 (7), 2896-2904, 2011 | 40 | 2011 |
Maximum likelihood parallel factor analysis (MLPARAFAC) L Vega‐Montoto, PD Wentzell Journal of Chemometrics: A Journal of the Chemometrics Society 17 (4), 237-253, 2003 | 38 | 2003 |
Refining comparative proteomics by spectral counting to account for shared peptides and multiple search engines YY Chen, S Dasari, ZQ Ma, LJ Vega-Montoto, M Li, DL Tabb Analytical and bioanalytical chemistry 404, 1115-1125, 2012 | 12 | 2012 |
Mathematical improvements to maximum likelihood parallel factor analysis: theory and simulations L Vega‐Montoto, H Gu, PD Wentzell Journal of Chemometrics: A Journal of the Chemometrics Society 19 (4), 216-235, 2005 | 12 | 2005 |
Approaching the direct exponential curve resolution algorithm from a maximum likelihood perspective L Vega-Montoto, PD Wentzell Analytica chimica acta 556 (2), 383-399, 2006 | 11 | 2006 |
Exploring the Interplay between Polyphenols and Lysyl Oxidase Enzymes for Maintaining Extracellular Matrix Homeostasis C Añazco, J Riedelsberger, L Vega-Montoto, A Rojas International Journal of Molecular Sciences 24 (13), 10985, 2023 | 9 | 2023 |
Mathematical improvements to maximum likelihood parallel factor analysis: experimental studies L Vega‐Montoto, PD Wentzell Journal of Chemometrics: A Journal of the Chemometrics Society 19 (4), 236-252, 2005 | 7 | 2005 |