Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs JA Gagnon, E Valen, SB Thyme, P Huang, L Ahkmetova, A Pauli, ... PloS one 9 (5), e98186, 2014 | 997 | 2014 |
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis A Pauli, E Valen, MF Lin, M Garber, NL Vastenhouw, JZ Levin, L Fan, ... Genome research 22 (3), 577-591, 2012 | 836 | 2012 |
Non-coding RNAs as regulators of embryogenesis A Pauli, JL Rinn, AF Schier Nature Reviews Genetics 12 (2), 136-149, 2011 | 699 | 2011 |
Toddler: an embryonic signal that promotes cell movement via Apelin receptors A Pauli, ML Norris, E Valen, GL Chew, JA Gagnon, S Zimmerman, ... Science 343 (6172), 1248636, 2014 | 642 | 2014 |
Cell-type-specific TEV protease cleavage reveals cohesin functions in Drosophila neurons A Pauli, F Althoff, RA Oliveira, S Heidmann, O Schuldiner, CF Lehner, ... Developmental cell 14 (2), 239-251, 2008 | 324 | 2008 |
Ribosome profiling reveals resemblance between long non-coding RNAs and 5′ leaders of coding RNAs GL Chew, A Pauli, JL Rinn, A Regev, AF Schier, E Valen Development 140 (13), 2828-2834, 2013 | 299 | 2013 |
High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies M Rabani, R Raychowdhury, M Jovanovic, M Rooney, DJ Stumpo, A Pauli, ... Cell 159 (7), 1698-1710, 2014 | 247 | 2014 |
Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish GL Chew, A Pauli, AF Schier Nature communications 7 (1), 11663, 2016 | 199 | 2016 |
Cohesin cleavage and Cdk inhibition trigger formation of daughter nuclei RA Oliveira, RS Hamilton, A Pauli, I Davis, K Nasmyth Nature cell biology 12 (2), 185-192, 2010 | 180 | 2010 |
Polycomb purification by in vivo biotinylation tagging reveals cohesin and Trithorax group proteins as interaction partners G Strübbe, C Popp, A Schmidt, A Pauli, L Ringrose, C Beisel, R Paro Proceedings of the National Academy of Sciences 108 (14), 5572-5577, 2011 | 121 | 2011 |
Selective roles of vertebrate PCF11 in premature and full-length transcript termination K Kamieniarz-Gdula, MR Gdula, K Panser, T Nojima, J Monks, ... Molecular cell 74 (1), 158-172. e9, 2019 | 115 | 2019 |
Identifying (non‐) coding RNAs and small peptides: Challenges and opportunities A Pauli, E Valen, AF Schier Bioessays 37 (1), 103-112, 2015 | 112 | 2015 |
Canonical nucleosome organization at promoters forms during genome activation Y Zhang, NL Vastenhouw, J Feng, K Fu, C Wang, Y Ge, A Pauli, ... Genome research 24 (2), 260-266, 2014 | 111 | 2014 |
Formation and nuclear export of preribosomes are functionally linked to the small‐ubiquitin‐related modifier pathway VG Panse, D Kressler, A Pauli, E Petfalski, M Gnädig, D Tollervey, E Hurt Traffic 7 (10), 1311-1321, 2006 | 105 | 2006 |
Conservation of DNA methylation in dipteran insects J Marhold, N Rothe, A Pauli, C Mund, K Kuehle, B Brueckner, F Lyko Insect Molecular Biology 13 (2), 117-123, 2004 | 93 | 2004 |
The Ly6/uPAR protein Bouncer is necessary and sufficient for species-specific fertilization S Herberg, KR Gert, A Schleiffer, A Pauli Science 361 (6406), 1029-1033, 2018 | 83 | 2018 |
A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands A Pauli, JG van Bemmel, RA Oliveira, T Itoh, K Shirahige, B van Steensel, ... Current Biology 20 (20), 1787-1798, 2010 | 81 | 2010 |
Loss of apela peptide in mice causes low penetrance embryonic lethality and defects in early mesodermal derivatives L Freyer, CW Hsu, S Nowotschin, A Pauli, J Ishida, K Kuba, A Fukamizu, ... Cell reports 20 (9), 2116-2130, 2017 | 75 | 2017 |
Decoding sORF translation–from small proteins to gene regulation LE Cabrera-Quio, S Herberg, A Pauli Rna Biology 13 (11), 1051-1059, 2016 | 67 | 2016 |
A rapid, highly sensitive and open-access SARS-CoV-2 detection assay for laboratory and home testing MJ Kellner, JJ Ross, J Schnabl, MPS Dekens, M Matl, R Heinen, ... Frontiers in Molecular Biosciences 9, 801309, 2022 | 64 | 2022 |