Activation of direct and indirect pathway medium spiny neurons drives distinct brain-wide responses HJ Lee, AJ Weitz, D Bernal-Casas, BA Duffy, MK Choy, AV Kravitz, ... Neuron 91 (2), 412-424, 2016 | 132 | 2016 |
Dexamethasone exacerbates cerebral edema and brain injury following lithium-pilocarpine induced status epilepticus BA Duffy, KP Chun, D Ma, MF Lythgoe, RC Scott Neurobiology of disease 63, 229-236, 2014 | 63 | 2014 |
Retrospective correction of motion artifact affected structural MRI images using deep learning of simulated motion BA Duffy, W Zhang, H Tang, L Zhao, M Law, AW Toga, H Kim Medical imaging with deep learning, 2018 | 62 | 2018 |
Retrospective motion artifact correction of structural MRI images using deep learning improves the quality of cortical surface reconstructions BA Duffy, L Zhao, F Sepehrband, J Min, DJJ Wang, Y Shi, AW Toga, ... Neuroimage 230, 117756, 2021 | 54 | 2021 |
Cochlear implantation in postlingually deaf adults is time-sensitive towards positive outcome: prediction using advanced machine learning techniques H Kim, WS Kang, HJ Park, JY Lee, JW Park, Y Kim, JW Seo, MY Kwak, ... Scientific reports 8 (1), 18004, 2018 | 53 | 2018 |
MRI compatible optrodes for simultaneous LFP and optogenetic fMRI investigation of seizure-like afterdischarges BA Duffy, MK Choy, MR Chuapoco, M Madsen, JH Lee Neuroimage 123, 173-184, 2015 | 51 | 2015 |
The LONI QC system: a semi-automated, web-based and freely-available environment for the comprehensive quality control of neuroimaging data H Kim, A Irimia, SM Hobel, M Pogosyan, H Tang, P Petrosyan, ... Frontiers in Neuroinformatics 13, 60, 2019 | 42 | 2019 |
Imaging seizure-induced inflammation using an antibody targeted iron oxide contrast agent BA Duffy, MK Choy, J Riegler, JA Wells, DC Anthony, RC Scott, ... Neuroimage 60 (2), 1149-1155, 2012 | 42 | 2012 |
Structural abnormality of the hippocampus associated with depressive symptoms in heart failure rats H Suzuki, A Sumiyoshi, Y Matsumoto, BA Duffy, T Yoshikawa, MF Lythgoe, ... Neuroimage 105, 84-92, 2015 | 41 | 2015 |
One model to synthesize them all: Multi-contrast multi-scale transformer for missing data imputation J Liu, S Pasumarthi, B Duffy, E Gong, K Datta, G Zaharchuk IEEE Transactions on Medical Imaging 42 (9), 2577-2591, 2023 | 37 | 2023 |
Enrichment and training improve cognition in rats with cortical malformations KR Jenks, MM Lucas, BA Duffy, AA Robbins, B Gimi, JM Barry, RC Scott PLoS One 8 (12), e84492, 2013 | 35 | 2013 |
White matter hyperintensities segmentation using the ensemble U-Net with multi-scale highlighting foregrounds G Park, J Hong, BA Duffy, JM Lee, H Kim Neuroimage 237, 118140, 2021 | 30 | 2021 |
Bimodal imaging of inflammation with SPECT/CT and MRI using iodine-125 labeled VCAM-1 targeting microparticle conjugates N Patel, BA Duffy, A Badar, MF Lythgoe, E Årstad Bioconjugate chemistry 26 (8), 1542-1549, 2015 | 30 | 2015 |
Optogenetic study of networks in epilepsy MK Choy, BA Duffy, JH Lee Journal of neuroscience research 95 (12), 2325-2335, 2017 | 28 | 2017 |
Repeated hippocampal seizures lead to brain-wide reorganization of circuits and seizure propagation pathways MK Choy, E Dadgar-Kiani, GO Cron, BA Duffy, F Schmid, BJ Edelman, ... Neuron 110 (2), 221-236. e4, 2022 | 22 | 2022 |
Improving brain age estimates with deep learning leads to identification of novel genetic factors associated with brain aging K Ning, BA Duffy, M Franklin, W Matloff, L Zhao, N Arzouni, F Sun, ... Neurobiology of Aging 105, 199-204, 2021 | 20 | 2021 |
Carbon monofilament electrodes for unit recording and functional MRI in same subjects MR Chuapoco, M Choy, F Schmid, BA Duffy, HJ Lee, JH Lee NeuroImage 186, 806-816, 2019 | 19 | 2019 |
Comparison of fMRI analysis methods for heterogeneous BOLD responses in block design studies J Liu, BA Duffy, D Bernal-Casas, Z Fang, JH Lee Neuroimage 147, 390-408, 2017 | 18 | 2017 |
Extinguishing febrile infection-related epilepsy syndrome: pipe dream or reality? ET Payne, S Koh, EC Wirrell Seminars in neurology 40 (02), 263-272, 2020 | 14 | 2020 |
Deep learning of cortical surface features using graph-convolution predicts neonatal brain age and neurodevelopmental outcome M Liu, BA Duffy, Z Sun, AW Toga, AJ Barkovich, D Xu, H Kim 2020 IEEE 17th international symposium on biomedical imaging (ISBI), 1335-1338, 2020 | 12 | 2020 |