Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals F Yabukarski, T Doukov, DA Mokhtari, S Du, D Herschlag Acta Crystallographica Section D: Structural Biology 78 (8), 945-963, 2022 | 13 | 2022 |
Decoupling of catalysis and transition state analog binding from mutations throughout a phosphatase revealed by high-throughput enzymology CJ Markin, DA Mokhtari, S Du, T Doukov, F Sunden, JA Cook, ... Proceedings of the National Academy of Sciences 120 (29), e2219074120, 2023 | 6 | 2023 |
Refinement of multiconformer ensemble models from multi-temperature X-ray diffraction data S Du, SA Wankowicz, F Yabukarski, T Doukov, D Herschlag, JS Fraser bioRxiv, 2023 | 6 | 2023 |
Conformational Ensembles Reveal the Origins of Serine Protease Catalysis S Du, RC Kretsch, J Parres-Gold, E Pieri, VWD Cruzeiro, M Zhu, ... bioRxiv, 2024.02. 28.582624, 2024 | 1 | 2024 |
High-throughput enzymology reveals mutations throughout a phosphatase that decouple catalysis and transition state analog affinity CJ Markin, DA Mokhtari, S Du, T Doukov, F Sunden, PM Fordyce, ... bioRxiv, 2022.11. 07.515533, 2022 | 1 | 2022 |
Suggested searches M Bayati, RV Kamat, AL Sharpe, M Pendharkar, J Hu, SJ Tran, G Zaborski, ... Perspective, 2024 | | 2024 |
Ensemble-function relationships to connect structure to mechanism: application of EnsemblePDB to the serine protease reaction coordinate and its catalytic features S Du, RC Kretsch, J Parres-Gold, DA Peñaherrera, F Yabukarski, ... Biophysical Journal 121 (3), 441a, 2022 | | 2022 |