The microbiome stress project: toward a global meta-analysis of environmental stressors and their effects on microbial communities JD Rocca, M Simonin, JR Blaszczak, JG Ernakovich, SM Gibbons, ... Frontiers in microbiology 9, 3272, 2019 | 163 | 2019 |
Antibiotic-induced changes in the microbiota disrupt redox dynamics in the gut AT Reese, EH Cho, B Klitzman, SP Nichols, NA Wisniewski, MM Villa, ... eLife 7, e35987, 2018 | 157 | 2018 |
Human Gut Microbiota Predicts Susceptibility to Vibrio cholerae Infection FS Midani, AA Weil, F Chowdhury, YA Begum, AI Khan, MD Debela, ... The Journal of infectious diseases 218 (4), 645-653, 2018 | 78 | 2018 |
The importance of accurately correcting for the natural abundance of stable isotopes FS Midani, ML Wynn, S Schnell Analytical biochemistry 520, 27-43, 2017 | 52 | 2017 |
AMiGA: Software for Automated Analysis of Microbial Growth Assays FS Midani, J Collins, RA Britton Msystems 6 (4), e00508-21, 2021 | 28* | 2021 |
Predicting Vibrio cholerae Infection and Disease Severity Using Metagenomics in a Prospective Cohort Study I Levade, MM Saber, FS Midani, F Chowdhury, AI Khan, YA Begum, ... The Journal of Infectious Diseases 223 (2), 342-351, 2021 | 28 | 2021 |
Gut microbiota from Sjögren syndrome patients causes decreased T regulatory cells in the lymphoid organs and desiccation-induced corneal barrier disruption in mice L Schaefer, CM Trujillo-Vargas, FS Midani, SC Pflugfelder, RA Britton, ... Frontiers in Medicine 9, 852918, 2022 | 21 | 2022 |
Systems biology analysis of the Clostridioides difficile core-genome contextualizes microenvironmental evolutionary pressures leading to genotypic and phenotypic … CJ Norsigian, HA Danhof, CK Brand, N Oezguen, FS Midani, BO Palsson, ... NPJ systems biology and applications 6 (1), 31, 2020 | 20 | 2020 |
A comparative study of gut microbiomes in captive nocturnal strepsirrhines SL Bornbusch, LK Greene, EA McKenney, SJ Volkoff, FS Midani, ... American journal of primatology 81 (10-11), e22986, 2019 | 19 | 2019 |
Impact of a human gut microbe on Vibrio cholerae host colonization through biofilm enhancement K Barrasso, D Chac, MD Debela, C Geigel, A Steenhaut, AR Seda, ... Elife 11, e73010, 2022 | 13 | 2022 |
Systems biology approach to functionally assess the Clostridioides difficile pangenome reveals genetic diversity with discriminatory power CJ Norsigian, HA Danhof, CK Brand, FS Midani, JT Broddrick, ... Proceedings of the National Academy of Sciences 119 (18), e2119396119, 2022 | 8 | 2022 |
Tracking defined microbial communities by multicolor flow cytometry reveals tradeoffs between productivity and diversity FS Midani, LA David Frontiers in Microbiology 13, 910390, 2023 | 7 | 2023 |
Nasal microbiota exhibit neither reproducible nor orderly dynamics following rhinoviral infection SN Nimmagadda, FS Midani, H Durand, AT Reese, CC Murdoch, ... medRxiv, 2020.04. 11.20061911, 2020 | 1 | 2020 |
Early life microbial succession in the gut follows common patterns in humans across the globe G Fahur Bottino, KS Bonham, F Patel, S McCann, M Zieff, N Naspolini, ... bioRxiv, 2024.07. 25.605223, 2024 | | 2024 |
Advancement of the multidisciplinary research paradigm via Facilities & Administration costs and cost recovery incentives FS Midani Journal of Science Policy and Governance, 2011 | | 2011 |